RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 LFNGQ8NES3 379 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 TSEN15Q8WW01 171 aaKnown RBP13.93□□□□□ -0.18
SYNE3-203ENST00000554873 FAM3CQ92520 227 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 MKKSQ9NPJ1 570 aaPredicted RBP13.93□□□□□ -0.18
SYNE3-203ENST00000554873 KLHDC2Q9Y2U9 406 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 SPACA6W5XKT8 324 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 HEATR5AQ86XA9 2040 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 CHD9Q3L8U1 2897 aa13.93□□□□□ -0.18
SYNE3-203ENST00000554873 PLRG1O43660 514 aaKnown RBP13.92□□□□□ -0.18
SYNE3-203ENST00000554873 SFT2D2O95562 160 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 IFNA6P05013 189 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 SEC11BP0C7V7 166 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 THEGLP0DJG4 465 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 LMO1P25800 156 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 AFF3P51826 1226 aaKnown RBP13.92□□□□□ -0.18
SYNE3-203ENST00000554873 RAC1P63000 192 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 IL15RAQ13261 267 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 RAB35Q15286 201 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 HIKESHIQ53FT3 197 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 SLC16A9Q7RTY1 509 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 TRAPPC6BQ86SZ2 158 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF679Q8IYX0 411 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 TMEM104Q8NE00 496 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 SNIP1Q8TAD8 396 aaKnown RBP13.92□□□□□ -0.18
SYNE3-203ENST00000554873 MARCH1Q8TCQ1 289 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 HOXB13Q92826 284 aaPredicted RBP13.92□□□□□ -0.18
SYNE3-203ENST00000554873 TSACCQ96A04 125 aaPredicted RBP13.92□□□□□ -0.18
SYNE3-203ENST00000554873 OR10C1Q96KK4 312 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF587Q96SQ5 575 aaPredicted RBP13.92□□□□□ -0.18
SYNE3-203ENST00000554873 ZFYVE21Q9BQ24 234 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 ALG12Q9BV10 488 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 GPR87Q9BY21 358 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 ULBP3Q9BZM4 244 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 K7EPK0 472 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 AMBPP02760 352 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 AKT2P31751 481 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 FCGR2CP31995 323 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 HRH1P35367 487 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 SEC13P55735 322 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 LINC01590Q5TEZ4 76 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF776Q68DI1 518 aaPredicted RBP13.92□□□□□ -0.18
SYNE3-203ENST00000554873 CA13Q8N1Q1 262 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 FAM71E2Q8N5Q1 922 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF283Q8N7M2 679 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 RCBTB1Q8NDN9 531 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 PLPP5Q8NEB5 264 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 OR13C9Q8NGT0 318 aa13.92□□□□□ -0.18
SYNE3-203ENST00000554873 METTL8Q9H825 291 aaKnown RBP13.92□□□□□ -0.18
SYNE3-203ENST00000554873 TLCD2A6NGC4 264 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 POU2F2P09086 479 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 SUCLG1P53597 346 aaKnown RBP13.91□□□□□ -0.18
SYNE3-203ENST00000554873 ERVFC1-1P60608 527 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 ADGRE4PQ86SQ3 457 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 HOGA1Q86XE5 327 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 PLPP7Q8NBV4 271 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 AQP3Q92482 292 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 RERGQ96A58 199 aaPredicted RBP13.91□□□□□ -0.18
SYNE3-203ENST00000554873 SNX22Q96L94 193 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 NKX3-1Q99801 234 aaPredicted RBP13.91□□□□□ -0.18
SYNE3-203ENST00000554873 ARV1Q9H2C2 271 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 STARD5Q9NSY2 213 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 CBLN4Q9NTU7 201 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 IKZF2Q9UKS7 526 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 MEMO1Q9Y316 297 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 STRAPQ9Y3F4 350 aaKnown RBP13.91□□□□□ -0.18
SYNE3-203ENST00000554873 ALPK2Q86TB3 2170 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 GRXCR1A8MXD5 290 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 H0Y8X5 98 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 TP53I11O14683 189 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 ARPC3O15145 178 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 OR5AC1P0C628 307 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 EPHA1P21709 976 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 CCKBRP32239 447 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 GLIPR1P48060 266 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 SLC9A3R2Q15599 337 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 DMRTA1Q5VZB9 504 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 CLEC18BQ6UXF7 455 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 FAM219AQ8IW50 185 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 FAM210BQ96KR6 192 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 TSSK2Q96PF2 358 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 PLA2G2FQ9BZM2 168 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 Q9N2J8 555 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.91□□□□□ -0.18
SYNE3-203ENST00000554873 GTF2A1LQ9UNN4 478 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 APODP05090 189 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 CDKN2AP42771 156 aaKnown RBP13.91□□□□□ -0.18
SYNE3-203ENST00000554873 CCR4P51679 360 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 TMEM33P57088 247 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 SLC35D2Q76EJ3 337 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 GVQW1Q8N7I0 195 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 EXD3Q8N9H8 876 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 GSKIPQ9P0R6 139 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 V9GYS6 101 aa13.91□□□□□ -0.18
SYNE3-203ENST00000554873 LINC01553A4QN01 128 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 HRKO00198 91 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 NUDT21O43809 227 aaKnown RBP13.9□□□□□ -0.18
SYNE3-203ENST00000554873 GDI1P31150 447 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 GNALP38405 381 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 DLK1P80370 383 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 GPR18Q14330 331 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms