RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 PRKACBP22694 351 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 TGFBR1P36897 503 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 RORCP51449 518 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 MXD1Q05195 221 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 SPOCK1Q08629 439 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 DGUOKQ16854 277 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 CNPY1Q3B7I2 92 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 GLT8D1Q68CQ7 371 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 TMEM42Q69YG0 159 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 ZNF529Q6P280 563 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 OR13C9Q8NGT0 318 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 SYNPRQ8TBG9 265 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 DYNC2LI1Q8TCX1 351 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 SPSB1Q96BD6 273 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 FOXRED1Q96CU9 486 aaPredicted RBP12.34□□□□□ -0.43
SHOX2-206ENST00000554685 SLC22A4Q9H015 551 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 PTTG2Q9NZH5 202 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 MRPL15Q9P015 296 aaKnown RBP12.34□□□□□ -0.43
SHOX2-206ENST00000554685 CGGBP1Q9UFW8 167 aaPredicted RBP12.34□□□□□ -0.43
SHOX2-206ENST00000554685 PURGQ9UJV8 347 aaKnown RBP12.34□□□□□ -0.43
SHOX2-206ENST00000554685 RNF115Q9Y4L5 304 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 MPC1Q9Y5U8 109 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 PCNX1Q96RV3 2341 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 HIVEP3Q5T1R4 2406 aa12.33□□□□□ -0.43
SHOX2-206ENST00000554685 TRAV8-7A0A075B6U6 113 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 NOTOA8MTQ0 251 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 TIMM8AO60220 97 aaPredicted RBP12.33□□□□□ -0.44
SHOX2-206ENST00000554685 MAS1P04201 325 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 ALDOBP05062 364 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 IGFBP2P18065 325 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 ATF1P18846 271 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 BDKRB2P30411 391 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 RPS19P39019 145 aaKnown RBP12.33□□□□□ -0.44
SHOX2-206ENST00000554685 FABP6P51161 128 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 KLF3P57682 345 aaPredicted RBP12.33□□□□□ -0.44
SHOX2-206ENST00000554685 ERVS71-1P61550 626 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 PSG7Q13046 419 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 TNK1Q13470 666 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 SNTB1Q13884 538 aaKnown RBP12.33□□□□□ -0.44
SHOX2-206ENST00000554685 OR2T2Q6IF00 324 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 LRRTM1Q86UE6 522 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 CDH26Q8IXH8 852 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 TMEM171Q8WVE6 324 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 AP3S1Q92572 193 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 SLC25A46Q96AG3 418 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 HIST1H2AAQ96QV6 131 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 DCUN1D5Q9BTE7 237 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 PAPOLGQ9BWT3 736 aaKnown RBP12.33□□□□□ -0.44
SHOX2-206ENST00000554685 CA10Q9NS85 328 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 CRIM1Q9NZV1 1036 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 GPR160Q9UJ42 338 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 RALYQ9UKM9 306 aaKnown RBP12.33□□□□□ -0.44
SHOX2-206ENST00000554685 SLC7A11Q9UPY5 501 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 V9GY05 133 aa12.33□□□□□ -0.44
SHOX2-206ENST00000554685 DIDO1Q9BTC0 2240 aaKnown RBP12.33□□□□□ -0.44
SHOX2-206ENST00000554685 ZNF462Q96JM2 2506 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 SHISA3A0PJX4 238 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 GMDSO60547 372 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 IGHV3-13P01766 116 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 HCKP08631 526 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 ZNF182P17025 639 aaPredicted RBP12.32□□□□□ -0.44
SHOX2-206ENST00000554685 MPV17P39210 176 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 HNRNPA0Q13151 305 aaKnown RBP12.32□□□□□ -0.44
SHOX2-206ENST00000554685 CEP78Q5JTW2 689 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 ADAM5Q6NVV9 412 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 VHLLQ6RSH7 139 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 ZDHHC23Q8IYP9 409 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 DNAAF1Q8NEP3 725 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 UBASH3BQ8TF42 649 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 PIGCQ92535 297 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 MRPL24Q96A35 216 aaKnown RBP12.32□□□□□ -0.44
SHOX2-206ENST00000554685 ORAI1Q96D31 301 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 PIK3IP1Q96FE7 263 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 MRI1Q9BV20 369 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 TPK1Q9H3S4 243 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 RHBDD3Q9Y3P4 386 aa12.32□□□□□ -0.44
SHOX2-206ENST00000554685 IGLV3-9A0A075B6K5 115 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.31□□□□□ -0.44
SHOX2-206ENST00000554685 A6NIN4 97 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 DEFB108AA8MXU0 73 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 SHISA9B4DS77 424 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 PRSS44E7EML9 344 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 PYCARD-AS1I3L0S3 204 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 CLEC2LP0C7M8 214 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 AZGP1P25311 298 aaKnown RBP12.31□□□□□ -0.44
SHOX2-206ENST00000554685 FUT6P51993 359 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 CAPZA1P52907 286 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 MZT1Q08AG7 82 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 PRDX4Q13162 271 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 DAZAP2Q15038 168 aaPredicted RBP12.31□□□□□ -0.44
SHOX2-206ENST00000554685 DDI2Q5TDH0 399 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 PLCXD3Q63HM9 321 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 ASPHD2Q6ICH7 369 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 SFXN4Q6P4A7 337 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 MEX3BQ6ZN04 569 aaKnown RBP12.31□□□□□ -0.44
SHOX2-206ENST00000554685 LHFPL2Q6ZUX7 228 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 MOB3CQ70IA8 216 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 BHLHE23Q8NDY6 225 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 OR8G5Q8NG78 346 aa12.31□□□□□ -0.44
SHOX2-206ENST00000554685 ACOT12Q8WYK0 555 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms