RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RGS13O14921 159 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 SOX14O95416 240 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 F13BP05160 661 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 IL7P13232 177 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 MAKP20794 623 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 GATA3P23771 443 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 ATP6V1E1P36543 226 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 SLC3A1Q07837 685 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 ZNF718Q3SXZ3 478 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 PABPC1L2AQ5JQF8 200 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 SLC35F1Q5T1Q4 408 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 LCN1P1Q5VSP4 162 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 AADACL4Q5VUY2 407 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 NXNL2Q5VZ03 156 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 LRFN4Q6PJG9 635 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 NHLRC1Q6VVB1 395 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 RDH10Q8IZV5 341 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 LRRC17Q8N6Y2 441 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 SYT14Q8NB59 555 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 OR2T33Q8NG76 320 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 OTULINQ96BN8 352 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 SOSTQ9BQB4 213 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 BARHL1Q9BZE3 327 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 EGLN1Q9GZT9 426 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 ABCB9Q9NP78 766 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 ERVK13-1Q9NX77 482 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 BABAM2Q9NXR7 383 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 TMEM5Q9Y2B1 443 aa7.5□□□□□ -1.21
TDP1-208ENST00000553989 SF3B6Q9Y3B4 125 aaKnown RBP7.5□□□□□ -1.21
TDP1-208ENST00000553989 C5orf49A4QMS7 147 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 UNC119BA6NIH7 251 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 FAM25AB3EWG3 89 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 FAM25CB3EWG5 89 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 FAM25GB3EWG6 89 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 TMEM127O75204 238 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 SLC2A10O95528 541 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 IGHV1-46P01743 117 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 IGHV3-13P01766 116 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 IGHA1P01876 353 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 SPNP16150 400 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 STOMP27105 288 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 CDAP32320 146 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 OMPP47874 163 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 GDI2P50395 445 aaKnown RBP7.49□□□□□ -1.21
TDP1-208ENST00000553989 DAP3P51398 398 aaKnown RBP7.49□□□□□ -1.21
TDP1-208ENST00000553989 UBA52P62987 128 aaKnown RBP7.49□□□□□ -1.21
TDP1-208ENST00000553989 RPL18Q07020 188 aaKnown RBP7.49□□□□□ -1.21
TDP1-208ENST00000553989 FOXL1Q12952 345 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 SGCAQ16586 387 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 NRN1LQ496H8 165 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 PYDC2Q56P42 97 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 ZMAT1Q5H9K5 638 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 FAM209AQ5JX71 171 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 THEM4Q5T1C6 240 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 NRARPQ7Z6K4 114 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 TPRA1Q86W33 373 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 DUSP18Q8NEJ0 188 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 OR6F1Q8NGZ6 308 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 ABHD4Q8TB40 342 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 GATAD2BQ8WXI9 593 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 NSMAFQ92636 917 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 DUX5Q96PT3 197 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 SLC19A3Q9BZV2 496 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 CYSLTR2Q9NS75 346 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 KLHL21Q9UJP4 597 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 CDH10Q9Y6N8 788 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 V9GYH0 126 aa7.49□□□□□ -1.21
TDP1-208ENST00000553989 MEIOCA2RUB1 952 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 M0R129 80 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 SURF4O15260 269 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 KCNAB3O43448 404 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 IDH3BO43837 385 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 TIMM8AO60220 97 aaPredicted RBP7.48□□□□□ -1.21
TDP1-208ENST00000553989 FOXH1O75593 365 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 SNAPC5O75971 98 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 ASAH2BP0C7U1 165 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 LIMS3P0CW19 117 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 LIMS4P0CW20 117 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 NR2C1P13056 603 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 ZNF32P17041 273 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 FUT1P19526 365 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 FUT4P22083 530 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 PAICSP22234 425 aaKnown RBP7.48□□□□□ -1.21
TDP1-208ENST00000553989 MPV17P39210 176 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 AQP2P41181 271 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 GUCA1AP43080 201 aaPredicted RBP7.48□□□□□ -1.21
TDP1-208ENST00000553989 MTNR1BP49286 362 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 INPP1P49441 399 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 TAS2R43P59537 309 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 ERVK-25P63136 954 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 FMODQ06828 376 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 HNRNPA0Q13151 305 aaKnown RBP7.48□□□□□ -1.21
TDP1-208ENST00000553989 ZFP69Q49AA0 526 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 TRIQKQ629K1 86 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 C22orf42Q6IC83 251 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 PLET1Q6UQ28 207 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 SHISA2Q6UWI4 295 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 LINC00114Q6XXX2 140 aa7.48□□□□□ -1.21
TDP1-208ENST00000553989 MEPCEQ7L2J0 689 aaKnown RBP7.48□□□□□ -1.21
TDP1-208ENST00000553989 ZNF101Q8IZC7 436 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms