RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PAGE3Q5JUK9 113 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 LIN9Q5TKA1 542 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 STUMQ69YW2 141 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 OR9G4Q8NGQ1 327 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 MITD1Q8WV92 249 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 PIH1D2Q8WWB5 315 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 CHCHD10Q8WYQ3 142 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-210ENST00000553693 NDRG1Q92597 394 aaKnown RBP2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ARPC1AQ92747 370 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 TCEAL4Q96EI5 215 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 C9orf72Q96LT7 481 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 SERPINB12Q96P63 405 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 OR5B12Q96R08 314 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 KCNA7Q96RP8 456 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 P2RX4Q99571 388 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 SH3GL3Q99963 347 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 MICU1Q9BPX6 476 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 RIOK2Q9BVS4 552 aaKnown RBP2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ZYG11BQ9C0D3 744 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ACTR3CQ9C0K3 210 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-210ENST00000553693 PSTPIP2Q9H939 334 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 LY9Q9HBG7 655 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 TMEM165Q9HC07 324 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 KCNJ16Q9NPI9 418 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 LGALS13Q9UHV8 139 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 HES2Q9Y543 173 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 COMMD3-BMI1R4GMX3 469 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 GREB1Q4ZG55 1949 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 COL4A2P08572 1712 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 CELSR3Q9NYQ7 3312 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 PIEZO2Q9H5I5 2752 aa2.15□□□□□ -2.06
SCFD1-210ENST00000553693 MYH6P13533 1939 aa2.15□□□□□ -2.06
SCFD1-210ENST00000553693 COL12A1Q99715 3063 aa2.15□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF462Q96JM2 2506 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 TEX15Q9BXT5 2789 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 IGLV3-22A0A075B6J6 115 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 IGKV1D-17A0A075B6S4 117 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 IGKV1D-8A0A087WSZ0 117 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 CIB4A0PJX0 185 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 MYBPHLA2RUH7 354 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 C12orf77C9JDV5 145 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 J3QKU1 62 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 NDUFS8O00217 210 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 HCRTR1O43613 425 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 FKBP6O75344 327 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 FCN3O75636 299 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 FARS2O95363 451 aaKnown RBP2.15□□□□□ -2.07
SCFD1-210ENST00000553693 PLEKHA8P1O95397 391 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 LSM8O95777 96 aaKnown RBP2.15□□□□□ -2.07
SCFD1-210ENST00000553693 CSTAP01040 98 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 PSMC3P17980 439 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 F2RP25116 425 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 U2AF2P26368 475 aaKnown RBP eCLIP2.15□□□□□ -2.071e-8■■□□□ 13.7
SCFD1-210ENST00000553693 SERPINB5P36952 375 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 TNFSF9P41273 254 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 LHX2P50458 406 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 RAB7AP51149 207 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF136P52737 540 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 VSX2P58304 361 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-210ENST00000553693 YWHAEP62258 255 aaKnown RBP2.15□□□□□ -2.07
SCFD1-210ENST00000553693 SMARCB1Q12824 385 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 TRAM2Q15035 370 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 NCF4Q15080 339 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 LRRC10Q5BKY1 277 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 THEM4Q5T1C6 240 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 AADACL4Q5VUY2 407 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 FAM71E1Q6IPT2 247 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 TMEM220Q6QAJ8 160 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 C6orf89Q6UWU4 347 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 MBOAT1Q6ZNC8 495 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 MRPL55Q7Z7F7 128 aaKnown RBP2.15□□□□□ -2.07
SCFD1-210ENST00000553693 TMEM150AQ86TG1 271 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 PNKDQ8N490 385 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 MREGQ8N565 214 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 OR5K2Q8NHB8 316 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 EEF1AKMT3Q96AZ1 226 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 TMEM246Q9BRR3 403 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 FAIM2Q9BWQ8 316 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 SPZ1Q9BXG8 430 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 ANKRD60Q9BZ19 345 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 UCK2Q9BZX2 261 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 RACGAP1Q9H0H5 632 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 CXCL16Q9H2A7 254 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 OR51M1Q9H341 326 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 SRMSQ9H3Y6 488 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 CLMPQ9H6B4 373 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 C8orf33Q9H7E9 229 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-210ENST00000553693 BEX1Q9HBH7 125 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 LYRM4Q9HD34 91 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 NRBP2Q9NSY0 501 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 FAM49BQ9NUQ9 324 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 MCUBQ9NWR8 336 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 ADA2Q9NZK5 511 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 CHMP5Q9NZZ3 219 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 MTRF1LQ9UGC7 380 aaKnown RBP2.15□□□□□ -2.07
SCFD1-210ENST00000553693 SDK1Q7Z5N4 2213 aa2.15□□□□□ -2.07
SCFD1-210ENST00000553693 BAZ2BQ9UIF8 2168 aaKnown RBP2.15□□□□□ -2.07
SCFD1-210ENST00000553693 MYO18BQ8IUG5 2567 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 TRAV6A0A075B6T7 132 aa2.14□□□□□ -2.07
SCFD1-210ENST00000553693 KCNE1BA0A087WTH5 132 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms