RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 M0R135 149 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 SIGLEC5O15389 551 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 TIPRLO75663 272 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 ACAA1P09110 424 aaPredicted RBP11.04□□□□□ -0.64
PRPF39-204ENST00000553605 MTPNP58546 118 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 PRKCDQ05655 676 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 SELPLGQ14242 412 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 SSX2Q16385 188 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 RFX4Q33E94 735 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 GLYATL3Q5SZD4 288 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 CCDC80Q76M96 950 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 OR52H1Q8NGJ2 320 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 OR5K1Q8NHB7 308 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 ANGPTL6Q8NI99 470 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 ANP32BQ92688 251 aaKnown RBP11.04□□□□□ -0.64
PRPF39-204ENST00000553605 MALSU1Q96EH3 234 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 ZNF799Q96GE5 643 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 PNRC2Q9NPJ4 139 aaKnown RBP11.04□□□□□ -0.64
PRPF39-204ENST00000553605 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.04□□□□□ -0.64
PRPF39-204ENST00000553605 BAG5Q9UL15 447 aa11.04□□□□□ -0.64
PRPF39-204ENST00000553605 STARD9Q9P2P6 4700 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 ANKRD30BLA7E2S9 258 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 ANOS1P23352 680 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 ZBED5Q49AG3 693 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 C11orf42Q8N5U0 333 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 OR2AJ1Q8NGZ0 328 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 SPTSSAQ969W0 71 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 FOXRED1Q96CU9 486 aaPredicted RBP11.03□□□□□ -0.64
PRPF39-204ENST00000553605 TSSK2Q96PF2 358 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 KCNK9Q9NPC2 374 aa11.03□□□□□ -0.64
PRPF39-204ENST00000553605 hCG_1809904A0A1W2PP81 198 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 A0A1W2PPE2 198 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 A0A1W2PPH5 198 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 A0A1W2PR64 198 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 A0A1W2PRV1 198 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 H3BUI4 141 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 DCTN6O00399 190 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 SOCS2O14508 198 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 CDC42EP2O14613 210 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 CRABP1P29762 137 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 IFNA8P32881 189 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 DDOSTP39656 456 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 GABRA2P47869 451 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 DYNLT3P51808 116 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 SLC25A1P53007 311 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 ERVFRD-1P60508 538 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 MXRA7P84157 204 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 SPIBQ01892 262 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 GPR139Q6DWJ6 353 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 DNM1P34Q6PK57 102 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 PTCHD4Q6ZW05 846 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 CPLX4Q7Z7G2 160 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 ADCK1Q86TW2 530 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 SBSPONQ8IVN8 264 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 ZNRF1Q8ND25 227 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRPF39-204ENST00000553605 NDEL1Q9GZM8 345 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 TLNRD1Q9H1K6 362 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 KAT8Q9H7Z6 458 aaKnown RBP11.02□□□□□ -0.65
PRPF39-204ENST00000553605 C19orf12Q9NSK7 152 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 A4GNTQ9UNA3 340 aa11.02□□□□□ -0.65
PRPF39-204ENST00000553605 TBL2Q9Y4P3 447 aaKnown RBP11.02□□□□□ -0.65
PRPF39-204ENST00000553605 ARG1P05089 322 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 LPLP06858 475 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 MYCNOSP40205 109 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 CDKN2AP42771 156 aaKnown RBP11.01□□□□□ -0.65
PRPF39-204ENST00000553605 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
PRPF39-204ENST00000553605 VMACQ2NL98 169 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 TMEM185AQ8NFB2 350 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 SLC26A10Q8NG04 563 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 OR10Z1Q8NGY1 313 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 OR10A6Q8NH74 314 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 PRRC1Q96M27 445 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 CITED4Q96RK1 184 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 CGREF1Q99674 301 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 MYLK2Q9H1R3 596 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 SRA1Q9HD15 236 aaKnown RBP11.01□□□□□ -0.65
PRPF39-204ENST00000553605 NRIP3Q9NQ35 241 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 CYB5R1Q9UHQ9 305 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 B9D1Q9UPM9 204 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 LRP12Q9Y561 859 aa11.01□□□□□ -0.65
PRPF39-204ENST00000553605 IGLV1-36A0A0B4J1U3 117 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 OR2AT4A6NND4 320 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 RGS16O15492 202 aaPredicted RBP11□□□□□ -0.65
PRPF39-204ENST00000553605 AKR7A2O43488 359 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 AZGP1P25311 298 aaKnown RBP11□□□□□ -0.65
PRPF39-204ENST00000553605 GNALP38405 381 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 ECI1P42126 302 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 GPR4P46093 362 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 GP2P55259 537 aaKnown RBP11□□□□□ -0.65
PRPF39-204ENST00000553605 NFYCQ13952 458 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 SLC36A3Q495N2 470 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 AGKQ53H12 422 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 LDLRAD2Q5SZI1 272 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 TMEM200BQ69YZ2 307 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 EPGNQ6UW88 154 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 ZNF782Q6ZMW2 699 aaPredicted RBP11□□□□□ -0.65
PRPF39-204ENST00000553605 TMPRSS11FQ6ZWK6 438 aa11□□□□□ -0.65
PRPF39-204ENST00000553605 DHDDSQ86SQ9 333 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms