RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 IGHV3OR15-7A0A075B7D8 119 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 IGLV1-36A0A0B4J1U3 117 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 A0A1W2PRD5 423 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 A0A1W2PRF3 423 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 A0A1W2PRM7 423 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 CD300LBA8K4G0 201 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 EFCAB9A8MZ26 197 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 FFAR1O14842 300 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 CHST1O43916 411 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 GMDSO60547 372 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 PPP1R3DO95685 299 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 GPR4P46093 362 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 TRAP1Q12931 704 aaKnown RBP5.91□□□□□ -1.46
ATXN3-219ENST00000553488 OR8G1Q15617 311 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 PCK2Q16822 640 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 RABL3Q5HYI8 236 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 WDR38Q5JTN6 314 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 HCP5Q6MZN7 132 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 CORO6Q6QEF8 472 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 PGAP1Q75T13 922 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 WDR86Q86TI4 376 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 NAA40Q86UY6 237 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 SPERTQ8NA61 448 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 GJC3Q8NFK1 279 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 OR4C13Q8NGP0 309 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 ACOT11Q8WXI4 607 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-219ENST00000553488 SGCDQ92629 289 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 SLCO4A1Q96BD0 722 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 TLCD1Q96CP7 247 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 ZNF583Q96ND8 569 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 ARPC5LQ9BPX5 153 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 DCTN5Q9BTE1 182 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 SLC22A4Q9H015 551 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 NUAK2Q9H093 628 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 NMNAT1Q9HAN9 279 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-219ENST00000553488 NRIP3Q9NQ35 241 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 SERTAD4Q9NUC0 356 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 C1orf123Q9NWV4 160 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 RPS6KA6Q9UK32 745 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 POLR1DQ9Y2S0 133 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 NDUFAF1Q9Y375 327 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 SNX13Q9Y5W8 968 aa5.91□□□□□ -1.46
ATXN3-219ENST00000553488 A0A087WUU8 490 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 MEIOCA2RUB1 952 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 J3KTA2 159 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 ANGPT2O15123 496 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 TXNDC12O95881 172 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 PAHP00439 452 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 CD28P10747 220 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 SELLP14151 372 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 EEF1B2P24534 225 aaKnown RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 OTX1P32242 354 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 RPL4P36578 427 aaKnown RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 CDKN2AP42771 156 aaKnown RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 UBE2E1P51965 193 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 MAGOHP61326 146 aaKnown RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 ZNF92Q03936 586 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 ACSM1Q08AH1 577 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 NSUN5P1Q3KNT7 163 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 SNAI3Q3KNW1 292 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 ZBED5Q49AG3 693 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 CYBRD1Q53TN4 286 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 NANOGP8Q6NSW7 305 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 SLC18B1Q6NT16 456 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 PGM2L1Q6PCE3 622 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 TBPL2Q6SJ96 375 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 CCBE1Q6UXH8 406 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 TMPRSS11FQ6ZWK6 438 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 CROCCP2Q86T23 111 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 ADCK1Q86TW2 530 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 LINC00346Q8IVM7 164 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 C11orf53Q8IXP5 236 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 SLC26A10Q8NG04 563 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 OR4S1Q8NGB4 309 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 OR8J3Q8NGG0 315 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 OR2AE1Q8NHA4 323 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 OR2T6Q8NHC8 308 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 TSPEARQ8WU66 669 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 SPRYD4Q8WW59 207 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 STON2Q8WXE9 905 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 TSSK2Q96PF2 358 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 CCL13Q99616 98 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 ATF6BQ99941 703 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 RABEP2Q9H5N1 569 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 RERGLQ9H628 205 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 ZNF702PQ9H963 129 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 NKIRAS1Q9NYS0 192 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 ADA2Q9NZK5 511 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 MRPL15Q9P015 296 aaKnown RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 RHCGQ9UBD6 479 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 DNAJB11Q9UBS4 358 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 PRPF19Q9UMS4 504 aaKnown RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 SIGLEC7Q9Y286 467 aa5.9□□□□□ -1.46
ATXN3-219ENST00000553488 NOP16Q9Y3C1 178 aaKnown RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 V9GYY5 206 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-219ENST00000553488 PLECQ15149 4684 aaKnown RBP5.9□□□□□ -1.47
ATXN3-219ENST00000553488 hCG_1807616A0A1W2PRN6 198 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 A6NLC8 198 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 HMGB1P1B2RPK0 211 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms