RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 TMEM9BQ9NQ34 198 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 CLEC3BP05452 202 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 CBR1P16152 277 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 CCL7P80098 99 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ZNF117Q03924 483 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ZNF90Q03938 601 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ZNF141Q15928 474 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 WDR89Q96FK6 387 aaPredicted RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ZC3HAV1LQ96H79 300 aaKnown RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 C4orf45Q96LM5 186 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 PARP12Q9H0J9 701 aaKnown RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 RYDENQ9NUL5 291 aaKnown RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ING1Q9UK53 422 aaPredicted RBP10.37□□□□□ -0.75
SYNE2-208ENST00000553289 ECM29Q5VYK3 1845 aa10.37□□□□□ -0.75
SYNE2-208ENST00000553289 XKRY2A2RUG3 117 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 ALG1L2C9J202 215 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 TNFSF15O95150 251 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 PCBP3P57721 371 aaKnown RBP10.36□□□□□ -0.75
SYNE2-208ENST00000553289 CLLU1Q5K131 121 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 ZFP62Q8NB50 900 aaPredicted RBP10.36□□□□□ -0.75
SYNE2-208ENST00000553289 OR8U1Q8NH10 309 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 SLC39A7Q92504 469 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 IER2Q9BTL4 223 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 FAHP16930 419 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 PI3P19957 117 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 MYBPHQ13203 477 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 RNPS1Q15287 305 aaKnown RBP10.36□□□□□ -0.75
SYNE2-208ENST00000553289 BATF2Q8N1L9 274 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 NTNG2Q96CW9 530 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 OR2A5Q96R48 311 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 NDRG3Q9UGV2 375 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 DOCK1Q14185 1865 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 IGHV3-15A0A0B4J1V0 119 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 M0R1B8 84 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 DVL1O14640 695 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 AGFG1P52594 562 aaKnown RBP10.36□□□□□ -0.75
SYNE2-208ENST00000553289 DVL1P1P54792 670 aaPredicted RBP10.36□□□□□ -0.75
SYNE2-208ENST00000553289 P2RX3P56373 397 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 MPPED2Q15777 294 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 FAM27D1Q5T7N8 215 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 TEX261Q6UWH6 196 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 MAMSTRQ6ZN01 415 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 OCIAD1Q9NX40 245 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 MTFP1Q9UDX5 166 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 U3KQ87 197 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 URB1O60287 2271 aaKnown RBP10.36□□□□□ -0.75
SYNE2-208ENST00000553289 ABCA3Q99758 1704 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 TMEM30CPA0ZSE6 113 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 MKRN2OSH3BPM6 223 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 PYCARD-AS1I3L0S3 204 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 RAB27BO00194 218 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 WDR38Q5JTN6 314 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 RGS7BPQ6MZT1 257 aaPredicted RBP10.36□□□□□ -0.75
SYNE2-208ENST00000553289 ARSGQ96EG1 525 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 COX14Q96I36 57 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 NDFIP1Q9BT67 221 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 EDEM2Q9BV94 578 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 RAB18Q9NP72 206 aa10.36□□□□□ -0.75
SYNE2-208ENST00000553289 FAM221AA4D161 298 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 AQP7O14520 342 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 C1QAP02745 245 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 KCNJ3P48549 501 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 GNG3P63215 75 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 HTRA4P83105 476 aaPredicted RBP10.35□□□□□ -0.75
SYNE2-208ENST00000553289 DUSP2Q05923 314 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 BAMBIQ13145 260 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 CROCCQ5TZA2 2017 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 TMEM123Q8N131 208 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 C1QTNF6Q9BXI9 259 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 PLAC1Q9HBJ0 212 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 SLC35D1Q9NTN3 355 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 PPM1DO15297 605 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 LINC01565O15544 149 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 FAM157BP0CG42 384 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 SULT1A3P0DMM9 295 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 SULT1A4P0DMN0 295 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 GLI4P10075 376 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 OR13D1Q8NGV5 346 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 OR5B3Q8NH48 314 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 EXTL1Q92935 676 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 KISS1RQ969F8 398 aaPredicted RBP10.35□□□□□ -0.75
SYNE2-208ENST00000553289 SMIM7Q9BQ49 75 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 CRYM-AS1A6NIL9 109 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 EPPINO95925 133 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 PGA3P0DJD8 388 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 ZIC1Q15915 447 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 AANATQ16613 207 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 PLA1AQ53H76 456 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 SSX9Q7RTT3 188 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 ZNF561Q8N587 486 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 LINC01555Q8NAE3 123 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 ROBO4Q8WZ75 1007 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 VN1R1Q9GZP7 353 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 ADGRL4Q9HBW9 690 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 RCL1Q9Y2P8 373 aaKnown RBP10.35□□□□□ -0.75
SYNE2-208ENST00000553289 CLEC18AA5D8T8 446 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 DHRS3O75911 302 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 PRSS23O95084 383 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms