RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 UBE2AP49459 152 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 ARG2P78540 354 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 DAZ2Q13117 558 aaKnown RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 IL17AQ16552 155 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 RBM48Q5RL73 367 aaKnown RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 SYT6Q5T7P8 510 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 RSBN1Q5VWQ0 802 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 FAM19A1Q7Z5A9 133 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 TMEM25Q86YD3 366 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 BOD1L2Q8IYS8 172 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 LRRC52Q8N7C0 313 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 C19orf18Q8NEA5 215 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 OR8G5Q8NG78 346 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 OR10G6Q8NH81 332 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 OR1S1Q8NH92 325 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 NT5CQ8TCD5 201 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 RDH5Q92781 318 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 RERGQ96A58 199 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 FAM19A4Q96LR4 140 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 IMMP1LQ96LU5 166 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 Q96MT0 163 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 DRC3Q9H069 523 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 CDC42EP4Q9H3Q1 356 aaKnown RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 METTL8Q9H825 291 aaKnown RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 NANOGQ9H9S0 305 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 DAZ3Q9NR90 486 aaKnown RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 SLC7A10Q9NS82 523 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 NDRG2Q9UN36 371 aaKnown RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 TFR2Q9UP52 801 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 ABCA7Q8IZY2 2146 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 ARHGAP23Q9P227 1491 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 ERI2A8K979 691 aaKnown RBP4.06□□□□□ -1.76
SCFD1-208ENST00000553278 TNFRSF11BO00300 401 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 TRAF3IP2O43734 574 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-208ENST00000553278 GLSO94925 669 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-208ENST00000553278 ACTL6AO96019 429 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 MMP7P09237 267 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-208ENST00000553278 TCN2P20062 427 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 ERCC8Q13216 396 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 RSPO1Q2MKA7 263 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-208ENST00000553278 STEAP4Q687X5 459 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 HBMQ6B0K9 141 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 PTRHD1Q6GMV3 140 aaKnown RBP4.06□□□□□ -1.76
SCFD1-208ENST00000553278 RTL4Q6ZR62 310 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 Q6ZT83 130 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 BBS7Q8IWZ6 715 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 OR51Q1Q8NH59 317 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 LINC01006Q8NI28 216 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 ABHD3Q8WU67 409 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 NRTNQ99748 197 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 HDHD3Q9BSH5 251 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-208ENST00000553278 EMC6Q9BV81 110 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 SAV1Q9H4B6 383 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-208ENST00000553278 C1orf109Q9NX04 203 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 VAX2Q9UIW0 290 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 TP53TG5Q9Y2B4 290 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 SNX24Q9Y343 169 aa4.06□□□□□ -1.76
SCFD1-208ENST00000553278 SCN2AQ99250 2005 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 ASTN1O14525 1302 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 ABCB11O95342 1321 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 A0A0A6YYH2 397 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 ISPDA4D126 451 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 A6NJ64 397 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 KLHL2O95198 593 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 SNAP29O95721 258 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 PET100P0DJ07 73 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 HLA-GP17693 338 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 CD70P32970 193 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 SSTR5P35346 364 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 IL5RAQ01344 420 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 PRKCDQ05655 676 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 TOMM34Q15785 309 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-208ENST00000553278 CDNFQ49AH0 187 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 AVPI1Q5T686 147 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 ZNF774Q6NX45 483 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 NCCRP1Q6ZVX7 275 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-208ENST00000553278 ATP6V1C2Q8NEY4 427 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 OR5AK3PQ8NH89 298 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 SFXN5Q8TD22 340 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 OR5P2Q8WZ92 322 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 CCDC127Q96BQ5 260 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 TM4SF18Q96CE8 201 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 CEP170P1Q96L14 293 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 TAAR1Q96RJ0 339 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 TIMM17AQ99595 171 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 DCUN1D5Q9BTE7 237 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 DSN1Q9H410 356 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 NLE1Q9NVX2 485 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-208ENST00000553278 USH1CQ9Y6N9 552 aa4.05□□□□□ -1.76
SCFD1-208ENST00000553278 IGLV11-55A0A075B6I3 123 aa4.04□□□□□ -1.76
SCFD1-208ENST00000553278 TRAV19A0A0A6YYK7 116 aa4.04□□□□□ -1.76
SCFD1-208ENST00000553278 GOLGA6L10A6NI86 522 aa4.04□□□□□ -1.76
SCFD1-208ENST00000553278 INS-IGF2F8WCM5 200 aa4.04□□□□□ -1.76
SCFD1-208ENST00000553278 HAT1O14929 419 aa4.04□□□□□ -1.76
SCFD1-208ENST00000553278 TCAPO15273 167 aa4.04□□□□□ -1.76
SCFD1-208ENST00000553278 CRXO43186 299 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-208ENST00000553278 AQP9O43315 295 aa4.04□□□□□ -1.76
SCFD1-208ENST00000553278 CD5LO43866 347 aa4.04□□□□□ -1.76
SCFD1-208ENST00000553278 SS18L1O75177 396 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-208ENST00000553278 CA11O75493 328 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms