RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ADCK1Q86TW2 530 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 DTX3Q8N9I9 347 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 OR8S1Q8NH09 359 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 C12orf43Q96C57 262 aaKnown RBP10.39□□□□□ -0.75
VPS29-211ENST00000553128 FAM46AQ96IP4 442 aaKnown RBP10.39□□□□□ -0.75
VPS29-211ENST00000553128 RAB3IPQ96QF0 476 aaPredicted RBP10.39□□□□□ -0.75
VPS29-211ENST00000553128 GPX7Q96SL4 187 aaPredicted RBP10.39□□□□□ -0.75
VPS29-211ENST00000553128 FNDC11Q9BVV2 318 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 PRSS22Q9GZN4 317 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 SIGLEC7Q9Y286 467 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 NKX6-3A6NJ46 265 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 VGLL3A8MV65 326 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 ANGPT2O15123 496 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 NDUFB2O95178 105 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 DUS4LO95620 317 aaKnown RBP10.38□□□□□ -0.75
VPS29-211ENST00000553128 NHLRC4P0CG21 123 aaPredicted RBP10.38□□□□□ -0.75
VPS29-211ENST00000553128 JUNBP17275 347 aaPredicted RBP10.38□□□□□ -0.75
VPS29-211ENST00000553128 COX7A1P24310 79 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 GRK5P34947 590 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 GSK3BP49841 420 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 BLMHQ13867 455 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 DMRTC1Q5HYR2 192 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 LDLRAD2Q5SZI1 272 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 GPR139Q6DWJ6 353 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 PGM2L1Q6PCE3 622 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 C10orf99Q6UWK7 81 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 VTCN1Q7Z7D3 282 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 RNF113BQ8IZP6 322 aaKnown RBP10.38□□□□□ -0.75
VPS29-211ENST00000553128 C11orf42Q8N5U0 333 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 LINC00482Q8N8I6 264 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 OR5D13Q8NGL4 314 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 ANGPTL6Q8NI99 470 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 FN3KQ9H479 309 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 C19orf12Q9NSK7 152 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 MRPL22Q9NWU5 206 aaKnown RBP10.38□□□□□ -0.75
VPS29-211ENST00000553128 N6AMT1Q9Y5N5 214 aa10.38□□□□□ -0.75
VPS29-211ENST00000553128 TCRBV4S1A1TA0A5B7 111 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 SIGLEC5O15389 551 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 TXNDC12O95881 172 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 CRABP1P29762 137 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 OTX1P32242 354 aaPredicted RBP10.37□□□□□ -0.75
VPS29-211ENST00000553128 CAV3P56539 151 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 MZT1Q08AG7 82 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 ARSJQ5FYB0 599 aaPredicted RBP10.37□□□□□ -0.75
VPS29-211ENST00000553128 FAM185AQ8N0U4 392 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 ZNRF1Q8ND25 227 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 OR2AJ1Q8NGZ0 328 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 MYDGFQ969H8 173 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 NMNAT3Q96T66 252 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 ASCL2Q99929 193 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 CHID1Q9BWS9 393 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 TLNRD1Q9H1K6 362 aa10.37□□□□□ -0.75
VPS29-211ENST00000553128 FAM90A8PA6NJQ4 464 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 ANKRD30BLA7E2S9 258 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 FXYD1O00168 92 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 AKR7A2O43488 359 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 ACAA1P09110 424 aaPredicted RBP10.36□□□□□ -0.75
VPS29-211ENST00000553128 KDELR2P33947 212 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 NAA10P41227 235 aaPredicted RBP10.36□□□□□ -0.75
VPS29-211ENST00000553128 PRKXP51817 358 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 SELENOWP63302 87 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 DNM1P34Q6PK57 102 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 ETV3LQ6ZN32 361 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 MRPL41Q8IXM3 137 aaKnown RBP10.36□□□□□ -0.75
VPS29-211ENST00000553128 MUC7Q8TAX7 377 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 RPL3LQ92901 407 aaKnown RBP10.36□□□□□ -0.75
VPS29-211ENST00000553128 SPTSSAQ969W0 71 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 MED30Q96HR3 178 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 C7orf26Q96N11 449 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 FGF23Q9GZV9 251 aaPredicted RBP10.36□□□□□ -0.75
VPS29-211ENST00000553128 DNTTIP1Q9H147 329 aa10.36□□□□□ -0.75
VPS29-211ENST00000553128 RPRD1BQ9NQG5 326 aaKnown RBP10.36□□□□□ -0.75
VPS29-211ENST00000553128 TSSC4Q9Y5U2 329 aaPredicted RBP10.36□□□□□ -0.75
VPS29-211ENST00000553128 IGKV1D-17A0A075B6S4 117 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 LCE6AA0A183 80 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 HLA-DQA2P01906 255 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 LMO1P25800 156 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 IFNA8P32881 189 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 LGALS4P56470 323 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 MAGOHP61326 146 aaKnown RBP10.35□□□□□ -0.75
VPS29-211ENST00000553128 FAM3AP98173 230 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 LYPD4Q6UWN0 246 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 ZNF782Q6ZMW2 699 aaPredicted RBP10.35□□□□□ -0.75
VPS29-211ENST00000553128 DPY19L2P2Q6ZN68 376 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 SLC16A9Q7RTY1 509 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 ZBTB46Q86UZ6 589 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 OR4K13Q8NH42 304 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 LZICQ8WZA0 190 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 SPSB4Q96A44 273 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 RSRC1Q96IZ7 334 aaKnown RBP10.35□□□□□ -0.75
VPS29-211ENST00000553128 ERMAPQ96PL5 475 aaPredicted RBP10.35□□□□□ -0.75
VPS29-211ENST00000553128 NKIRAS1Q9NYS0 192 aa10.35□□□□□ -0.75
VPS29-211ENST00000553128 GMPR2Q9P2T1 348 aaKnown RBP10.35□□□□□ -0.75
VPS29-211ENST00000553128 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.35□□□□□ -0.75
VPS29-211ENST00000553128 V9GYY5 206 aaPredicted RBP10.35□□□□□ -0.75
VPS29-211ENST00000553128 OR6C68A6NDL8 312 aa10.34□□□□□ -0.75
VPS29-211ENST00000553128 RHBDL1O75783 438 aa10.34□□□□□ -0.75
VPS29-211ENST00000553128 IFNA14P01570 189 aa10.34□□□□□ -0.75
VPS29-211ENST00000553128 IFNW1P05000 195 aa10.34□□□□□ -0.75
VPS29-211ENST00000553128 TROVE2P10155 538 aaKnown RBP eCLIP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms