RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 ANKRD49Q8WVL7 239 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SGK3Q96BR1 496 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 FAF2Q96CS3 445 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 JSRP1Q96MG2 331 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 FOXN4Q96NZ1 517 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PANX2Q96RD6 677 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 MCRIP2Q9BUT9 160 aaKnown RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 NMUR2Q9GZQ4 415 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 ANKRD19PQ9H560 264 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PROK2Q9HC23 129 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 MEPEQ9NQ76 525 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 C20orf96Q9NUD7 363 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 ZNHIT6Q9NWK9 470 aaKnown RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 IMPAD1Q9NX62 359 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SIGLEC8Q9NYZ4 499 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 WARS2Q9UGM6 360 aaKnown RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SPATA2Q9UM82 520 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PACSIN2Q9UNF0 486 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 RPL26L1Q9UNX3 145 aaKnown RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 SAMD4AQ9UPU9 718 aaKnown RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PDE10AQ9Y233 779 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 RPL36Q9Y3U8 105 aaKnown RBP2.98□□□□□ -1.93
LIMA1-208ENST00000551691 PRSS21Q9Y6M0 314 aa2.98□□□□□ -1.93
LIMA1-208ENST00000551691 HECTD4Q9Y4D8 3996 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 IGKV1-8A0A0C4DH67 115 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 A0A1B0GUS0 222 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 A0A1W2PP18 115 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 A0A1W2PPV9 198 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CCT8L1PA6NM43 557 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 BOLA2-SMG1P6H3BVE0 249 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 GFYI3L273 518 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 K7EQG2 157 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 KCNK1O00180 336 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 SOX15O60248 233 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 RDH16O75452 317 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 FGFR1OPO95684 399 aaKnown RBP2.97□□□□□ -1.93
LIMA1-208ENST00000551691 IGHV3-9P01782 118 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CRYGBP07316 175 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 ERCC1P07992 297 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CCDC172P0C7W6 258 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 IL1RNP18510 177 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 OMGP23515 440 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 MIPP30301 263 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CALCRP30988 508 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 OTX1P32242 354 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CD80P33681 288 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 GCKP35557 465 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CD151P48509 253 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 SSR4P51571 173 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 BCAP31P51572 246 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CARD18P57730 90 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 HILS1P60008 231 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 KRTAP10-3P60369 221 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 MS4A2Q01362 244 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 SCRN3Q0VDG4 424 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 GK3PQ14409 553 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 TSC22D1Q15714 1073 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 LTB4RQ15722 352 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 BEX5Q5H9J7 111 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF506Q5JVG8 444 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 OR52E8Q6IFG1 317 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 TMEM53Q6P2H8 277 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 C18orf65Q6ZTR6 163 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 FGFRL1Q8N441 504 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CNEP1R1Q8N9A8 125 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 FNDC5Q8NAU1 212 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 APCDD1LQ8NCL9 501 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 OR5K2Q8NHB8 316 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 DTX3LQ8TDB6 740 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 ZNF418Q8TF45 676 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-208ENST00000551691 C22orf15Q8WYQ4 148 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 ELMO1Q92556 727 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 UFD1Q92890 307 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CCDC126Q96EE4 140 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 MCEEQ96PE7 176 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 CNN2Q99439 309 aaKnown RBP2.97□□□□□ -1.93
LIMA1-208ENST00000551691 TSG101Q99816 390 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 BCL7BQ9BQE9 202 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 SIKE1Q9BRV8 207 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 UGT2B28Q9BY64 529 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 ROGDIQ9GZN7 287 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 DRC3Q9H069 523 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 DNTTIP1Q9H147 329 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 STMN4Q9H169 189 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-208ENST00000551691 TUBB1Q9H4B7 451 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 SDF2L1Q9HCN8 221 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 LYARQ9NX58 379 aaKnown RBP2.97□□□□□ -1.93
LIMA1-208ENST00000551691 THUMPD1Q9NXG2 353 aaKnown RBP2.97□□□□□ -1.93
LIMA1-208ENST00000551691 ADAM22Q9P0K1 906 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 STK38LQ9Y2H1 464 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 KCNIP3Q9Y2W7 256 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 MOB4Q9Y3A3 225 aa2.97□□□□□ -1.93
LIMA1-208ENST00000551691 HERC1Q15751 4861 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 STAB2Q8WWQ8 2551 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 RBMY1BA6NDE4 496 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 RBMY1EA6NEQ0 496 aaKnown RBP2.96□□□□□ -1.94
LIMA1-208ENST00000551691 DHRS7CA6NNS2 312 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 NR5A2O00482 541 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 SPOPO43791 374 aa2.96□□□□□ -1.94
LIMA1-208ENST00000551691 MFSD11O43934 449 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms