RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 GRTP1Q5TC63 336 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 RNLSQ5VYX0 342 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 LIN54Q6MZP7 749 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 KLC3Q6P597 504 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CCDC137Q6PK04 289 aaKnown RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ARL9Q6T311 187 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 C10orf99Q6UWK7 81 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 GPRIN3Q6ZVF9 776 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SLC16A14Q7RTX9 510 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 PIGWQ7Z7B1 504 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF429Q86V71 674 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 LCA5Q86VQ0 697 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM139Q8IV31 216 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF695Q8IW36 515 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 RIMKLAQ8IXN7 391 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 KDM8Q8N371 416 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 PNKDQ8N490 385 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 GCSAMQ8N6F7 178 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 MAPKAPK5-AS1Q8N8E1 139 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TEX45Q8NA69 505 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 PCYOX1LQ8NBM8 494 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 FBXO36Q8NEA4 188 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR10AD1Q8NGE0 317 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR5D16Q8NGK9 328 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR6N1Q8NGY5 312 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR4Q3Q8NH05 313 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR8U1Q8NH10 309 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR5K1Q8NHB7 308 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CLHC1Q8NHS4 586 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF420Q8TAQ5 688 aaPredicted RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 METTL6Q8TCB7 284 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 RPS4Y2Q8TD47 263 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 MYOZ3Q8TDC0 251 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 LRRC8CQ8TDW0 803 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR5P2Q8WZ92 322 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 RORBQ92753 470 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CDKL2Q92772 493 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SLC38A4Q969I6 547 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ROPN1LQ96C74 230 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 MALSU1Q96EH3 234 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 L3HYPDHQ96EM0 354 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CFAP36Q96G28 342 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SLC25A44Q96H78 314 aaPredicted RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF414Q96IQ9 312 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TXNDC15Q96J42 360 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 AKR1E2Q96JD6 320 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 C4orf45Q96LM5 186 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CCDC115Q96NT0 180 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 DUX3Q96PT4 197 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 UHRF2Q96PU4 802 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TRNT1Q96Q11 434 aaKnown RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SH3GL3Q99963 347 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ECSITQ9BQ95 431 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 PYGO2Q9BRQ0 406 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SLC25A33Q9BSK2 321 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR2H1Q9GZK4 316 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 WNT5BQ9H1J7 359 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OR51B6Q9H340 312 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 GLTPQ9NZD2 209 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TXNDC16Q9P2K2 825 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 RNF14Q9UBS8 474 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TMCC3Q9ULS5 477 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TMED5Q9Y3A6 229 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TBL2Q9Y4P3 447 aaKnown RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TRAV36DV7A0A075B6V5 113 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ELOVL7A1L3X0 281 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 GMNCA6NCL1 334 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 FAM90A20PA6NIJ5 464 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TRIM64CA6NLI5 447 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 G3V2L1 256 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 M0QZK8 103 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 HMGN4O00479 90 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 PLPP3O14495 311 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 RTL8CO15255 209 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 EIF3HO15372 352 aaKnown RBP eCLIP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 SCN2BO60939 215 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 PIAS1O75925 651 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 GLCEO94923 617 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 SEC31AO94979 1220 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 MBD3O95983 291 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 IGHG1P01857 330 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 BGLAPP02818 100 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 DBIP07108 87 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 SNRPAP09012 282 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 CST2P09228 141 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TSPAN19P0C672 248 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 IGHV1-8P0DP01 117 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 NEFHP12036 1026 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 GP9P14770 177 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF32P17041 273 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 CCNA2P20248 432 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 DCTDP32321 178 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 GGT2P36268 569 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 RPL3P39023 403 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ARL1P40616 181 aaPredicted RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 RPS5P46782 204 aaKnown RBP1.73□□□□□ -2.13
PTCH1-223ENST00000551623 ERFP50548 548 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 TCTAP57738 103 aa1.73□□□□□ -2.13
PTCH1-223ENST00000551623 PCBD1P61457 104 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms