RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 HEXA-AS1Q9H8Q6 139 aa9.58□□□□□ -0.88
PTCH1-222ENST00000551425 HAO2Q9NYQ3 351 aa9.58□□□□□ -0.88
PTCH1-222ENST00000551425 BAG5Q9UL15 447 aa9.58□□□□□ -0.88
PTCH1-222ENST00000551425 HYDINQ4G0P3 5121 aa9.58□□□□□ -0.88
PTCH1-222ENST00000551425 IMPA2O14732 288 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 SIGLEC5O15389 551 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 RAMP3O60896 148 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 TIPRLO75663 272 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 NDUFB7P17568 137 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 POU1F1P28069 291 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 RAB13P51153 203 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 LGALS4P56470 323 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 MTPNP58546 118 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 ST3GAL3Q11203 375 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 SELPLGQ14242 412 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 SNAI3Q3KNW1 292 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 METTL21CQ5VZV1 264 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 GPR139Q6DWJ6 353 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 DPY19L4Q7Z388 723 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 CENPVQ7Z7K6 275 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-222ENST00000551425 ADCK1Q86TW2 530 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 NRMQ8IXM6 262 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 MKXQ8IYA7 352 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 DYNAPQ8N1N2 210 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 OR8S1Q8NH09 359 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 OR2AE1Q8NHA4 323 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 RAB3IPQ96QF0 476 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-222ENST00000551425 ASCL2Q99929 193 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 ELAC2Q9BQ52 826 aaKnown RBP9.57□□□□□ -0.88
PTCH1-222ENST00000551425 TMEM120AQ9BXJ8 343 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 FAM107BQ9H098 131 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 TLNRD1Q9H1K6 362 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 KAT8Q9H7Z6 458 aaKnown RBP9.57□□□□□ -0.88
PTCH1-222ENST00000551425 PALMDQ9NP74 551 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 PNRC2Q9NPJ4 139 aaKnown RBP9.57□□□□□ -0.88
PTCH1-222ENST00000551425 ZNF391Q9UJN7 358 aa9.57□□□□□ -0.88
PTCH1-222ENST00000551425 M0R135 149 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 ACAA1P09110 424 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-222ENST00000551425 OR1E2P47887 323 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 CSNK2BP67870 215 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 SF3A3Q12874 501 aaKnown RBP eCLIP9.56□□□□□ -0.88
PTCH1-222ENST00000551425 VMACQ2NL98 169 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 RFX4Q33E94 735 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 ZBED5Q49AG3 693 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 ETV3LQ6ZN32 361 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 LHFPL4Q7Z7J7 247 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-222ENST00000551425 OR4X2Q8NGF9 303 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 OR56B2PQ8NGI1 322 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 OR5K1Q8NHB7 308 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 TFAP2CQ92754 450 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 ZNF799Q96GE5 643 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 CGREF1Q99674 301 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 NDEL1Q9GZM8 345 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 NRIP3Q9NQ35 241 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 ABCB10Q9NRK6 738 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 MRGBPQ9NV56 204 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 A4GNTQ9UNA3 340 aa9.56□□□□□ -0.88
PTCH1-222ENST00000551425 IGLV1-36A0A0B4J1U3 117 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 DCTN6O00399 190 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 CDC42EP2O14613 210 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 CDIPTO14735 213 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 SNX3O60493 162 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 ANOS1P23352 680 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 CHATP28329 748 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 CRABP1P29762 137 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 DDOSTP39656 456 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 CENPAP49450 140 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 GZMMP51124 257 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 DYNLT3P51808 116 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 MXRA7P84157 204 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 SPIBQ01892 262 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 PLA1AQ53H76 456 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 GLYATL3Q5SZD4 288 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 DNM1P34Q6PK57 102 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 PTCHD4Q6ZW05 846 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 TMPRSS11FQ6ZWK6 438 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 MEPCEQ7L2J0 689 aaKnown RBP9.55□□□□□ -0.88
PTCH1-222ENST00000551425 DHDDSQ86SQ9 333 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 LINC00346Q8IVM7 164 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 RNF113BQ8IZP6 322 aaKnown RBP9.55□□□□□ -0.88
PTCH1-222ENST00000551425 C11orf42Q8N5U0 333 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 DPP10Q8N608 796 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 SLC26A10Q8NG04 563 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 OR51D1Q8NGF3 324 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 FOXRED1Q96CU9 486 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-222ENST00000551425 PRRC1Q96M27 445 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 TSSK2Q96PF2 358 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 GPX7Q96SL4 187 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-222ENST00000551425 WDR13Q9H1Z4 485 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 RABEP2Q9H5N1 569 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 OPA3Q9H6K4 179 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 ELL3Q9HB65 397 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-222ENST00000551425 SNTG1Q9NSN8 517 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-222ENST00000551425 CYB5R1Q9UHQ9 305 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 LRP12Q9Y561 859 aa9.55□□□□□ -0.88
PTCH1-222ENST00000551425 ANKRD30BLA7E2S9 258 aa9.54□□□□□ -0.88
PTCH1-222ENST00000551425 RHBDL1O75783 438 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms