RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 PRF1P14222 555 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 ARR3P36575 388 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 GSG1Q2KHT4 349 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 C11orf91Q3C1V1 193 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 NSUN5P2Q63ZY6 315 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 Q8NA96 180 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 DUSP18Q8NEJ0 188 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 POFUT1Q9H488 388 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 CRIM1Q9NZV1 1036 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 RBMX2Q9Y388 322 aaKnown RBP17.06■□□□□ 0.32
SSH1-209ENST00000551165 TNFSF13O75888 250 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 ALDOBP05062 364 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 TPOP07202 933 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 SLC6A1P30531 599 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 HOXD11P31277 338 aaPredicted RBP17.06■□□□□ 0.32
SSH1-209ENST00000551165 RIPPLY1Q0D2K3 151 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 HLXQ14774 488 aaPredicted RBP17.06■□□□□ 0.32
SSH1-209ENST00000551165 FAAP20Q6NZ36 180 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 UTS2BQ765I0 119 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 ZNF101Q8IZC7 436 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 NICN1Q9BSH3 213 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 OR51B6Q9H340 312 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 BANF2Q9H503 90 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 FAM215AQ9Y5M1 114 aa17.06■□□□□ 0.32
SSH1-209ENST00000551165 GMDSO60547 372 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 BPNT1O95861 308 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 PLA1AQ53H76 456 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 DNM1P46Q6ZS02 220 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 Q6ZT83 130 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 ZNF554Q86TJ5 538 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 NAXEQ8NCW5 288 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 PHF21AQ96BD5 680 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 ATPIF1Q9UII2 106 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 STARD10Q9Y365 291 aa17.05■□□□□ 0.32
SSH1-209ENST00000551165 TMEM14DPA8MWL7 114 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 RRP8O43159 456 aaKnown RBP17.04■□□□□ 0.32
SSH1-209ENST00000551165 FAM87AP0C7U9 286 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 CCR6P51684 374 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 RAB25P57735 213 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 TMEM53Q6P2H8 277 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 PLET1Q6UQ28 207 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 RAB22AQ9UL26 194 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 PRR14LQ5THK1 2151 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 IGKV1-27A0A075B6S5 117 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 A0A0A6YYD4 124 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 RAB27BO00194 218 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 HNRNPCP07910 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
SSH1-209ENST00000551165 COX5BP10606 129 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 WNT5AP41221 380 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 GK2Q14410 553 aaPredicted RBP17.04■□□□□ 0.32
SSH1-209ENST00000551165 GABRA6Q16445 453 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 CD163Q86VB7 1156 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 CISD2Q8N5K1 135 aaKnown RBP17.04■□□□□ 0.32
SSH1-209ENST00000551165 OR10K1Q8NGX5 313 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 SPSB4Q96A44 273 aa17.04■□□□□ 0.32
SSH1-209ENST00000551165 OPN3Q9H1Y3 402 aaPredicted RBP17.04■□□□□ 0.32
SSH1-209ENST00000551165 CRYABP02511 175 aaKnown RBP17.03■□□□□ 0.32
SSH1-209ENST00000551165 GIFP27352 417 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 HACD4Q5VWC8 232 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 RSBN1Q5VWQ0 802 aaPredicted RBP17.03■□□□□ 0.32
SSH1-209ENST00000551165 ZNF610Q8N9Z0 462 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 STARD4Q96DR4 205 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 RABL2AQ9UBK7 228 aaPredicted RBP17.03■□□□□ 0.32
SSH1-209ENST00000551165 RABL2BQ9UNT1 228 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 RP1L1Q8IWN7 2480 aaPredicted RBP17.03■□□□□ 0.32
SSH1-209ENST00000551165 FAM230AA0A1W2PPH8 454 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 RAB6AP20340 208 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 PTGFRP43088 359 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 VEGFCP49767 419 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 PER3P56645 1201 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 PLP2Q04941 152 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 SNTB2Q13425 540 aaKnown RBP17.03■□□□□ 0.32
SSH1-209ENST00000551165 OR8B8Q15620 311 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 SLC22A6Q4U2R8 563 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 ZNF324BQ6AW86 544 aaPredicted RBP17.03■□□□□ 0.32
SSH1-209ENST00000551165 OR6K3Q8NGY3 331 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 PTX4Q96A99 478 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 C10orf35Q96D05 121 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 ITPKCQ96DU7 683 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 C1QTNF6Q9BXI9 259 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 HRASLSQ9HDD0 168 aa17.03■□□□□ 0.32
SSH1-209ENST00000551165 MBD3L4A6NDZ8 208 aaPredicted RBP17.02■□□□□ 0.32
SSH1-209ENST00000551165 MBD3L3A6NE82 208 aaPredicted RBP17.02■□□□□ 0.32
SSH1-209ENST00000551165 MBD3L5A6NJ08 208 aaPredicted RBP17.02■□□□□ 0.32
SSH1-209ENST00000551165 DHRS7CA6NNS2 312 aa17.02■□□□□ 0.32
SSH1-209ENST00000551165 XRCC2O43543 280 aa17.02■□□□□ 0.32
SSH1-209ENST00000551165 SFRP4Q6FHJ7 346 aaPredicted RBP17.02■□□□□ 0.32
SSH1-209ENST00000551165 MBD3L2Q8NHZ7 208 aaPredicted RBP17.02■□□□□ 0.32
SSH1-209ENST00000551165 LPAR5Q9H1C0 372 aa17.02■□□□□ 0.32
SSH1-209ENST00000551165 RGCCQ9H4X1 137 aa17.02■□□□□ 0.32
SSH1-209ENST00000551165 PTTG3PQ9NZH4 202 aa17.02■□□□□ 0.32
SSH1-209ENST00000551165 TMEM235A6NFC5 223 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 MPIG6BO95866 241 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 PLATP00750 562 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 CGAP01215 116 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 PRR30Q53SZ7 412 aaPredicted RBP17.02■□□□□ 0.31
SSH1-209ENST00000551165 TMEM42Q69YG0 159 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 FAM180AQ6UWF9 173 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 CDH26Q8IXH8 852 aa17.02■□□□□ 0.31
SSH1-209ENST00000551165 GABRG1Q8N1C3 465 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms