RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 GALNT4Q8N4A0 578 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 FTMTQ8N4E7 242 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 CSNK2A3Q8NEV1 391 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 OR51L1Q8NGJ5 315 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 OR9Q1Q8NGQ5 310 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 OR10Z1Q8NGY1 313 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 BTBD10Q9BSF8 475 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 DCTN5Q9BTE1 182 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 LYVE1Q9Y5Y7 322 aa10.56□□□□□ -0.72
PTCH1-221ENST00000550914 hCG_38984A0A1B0GV85 526 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 A0A1B0GW55 424 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DHRS12A0PJE2 317 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 NPFFO15130 113 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 ARPC2O15144 300 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 TBX1O43435 398 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DUX4L2P0CJ85 424 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DUX4L3P0CJ86 424 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DUX4L4P0CJ87 422 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DUX4L5P0CJ88 424 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DUX4L6P0CJ89 424 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DUX4L7P0CJ90 424 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 SPI1P17947 270 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 GNALP38405 381 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 CX3CR1P49238 355 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 IL5RAQ01344 420 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 CRMP1Q14194 572 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 HSP90B2PQ58FF3 399 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 STUMQ69YW2 141 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 ZNF770Q6IQ21 691 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DUX4L9Q6RFH8 374 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-221ENST00000550914 PRSS45Q7RTY3 260 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 PDZD9Q8IXQ8 264 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 PGAM4Q8N0Y7 254 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 FAM216BQ8N7L0 139 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 ZNF511Q8NB15 262 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 OR8D4Q8NGM9 314 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 RNF133Q8WVZ7 376 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 SGK3Q96BR1 496 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 REEP6Q96HR9 211 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 RGCCQ9H4X1 137 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 ABCB9Q9NP78 766 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 TBC1D23Q9NUY8 699 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 DUX4Q9UBX2 424 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 N6AMT1Q9Y5N5 214 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 MPC1Q9Y5U8 109 aa10.55□□□□□ -0.72
PTCH1-221ENST00000550914 ZNF816-ZNF321PA0A0X1KG74 233 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 TMEM210A6NLX4 147 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 ANXA2P2A6NMY6 339 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 RNASEK-C17orf49H0YIS7 233 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 M0R1W7 72 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 TNFRSF11BO00300 401 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 ACOT8O14734 319 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 CDIPTO14735 213 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 TSPAN15O95858 294 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 IFNGP01579 166 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 ANXA2P07355 339 aaKnown RBP10.54□□□□□ -0.72
PTCH1-221ENST00000550914 HSD11B1P28845 292 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 GSK3AP49840 483 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 UBE2E1P51965 193 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 CSNK2BP67870 215 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 ACSM1Q08AH1 577 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 NCR3LG1Q68D85 454 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 FGFRL1Q8N441 504 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 Q8N7P7 452 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 OR2T33Q8NG76 320 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 OR9Q2Q8NGE9 314 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 OR6K6Q8NGW6 343 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 ITPKCQ96DU7 683 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 MED30Q96HR3 178 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 RAB3IPQ96QF0 476 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-221ENST00000550914 MICU1Q9BPX6 476 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 RTL8AQ9BWD3 113 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 PAPOLGQ9BWT3 736 aaKnown RBP10.54□□□□□ -0.72
PTCH1-221ENST00000550914 TSSK6Q9BXA6 273 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 OR10A2Q9H208 303 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 METTL8Q9H825 291 aaKnown RBP10.54□□□□□ -0.72
PTCH1-221ENST00000550914 MED4Q9NPJ6 270 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 SIRT7Q9NRC8 400 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 HAO2Q9NYQ3 351 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 FBLN5Q9UBX5 448 aa10.54□□□□□ -0.72
PTCH1-221ENST00000550914 NKX6-3A6NJ46 265 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 CCNB2O95067 398 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 PAHP00439 452 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 GASTP01350 101 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 GYPBP06028 91 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 AMY2BP19961 511 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 SAA4P35542 130 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 MAGEA2P43356 314 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 CAV3P56539 151 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 ELF3P78545 371 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-221ENST00000550914 IKZF1Q13422 519 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 EIF2B1Q14232 305 aaKnown RBP10.53□□□□□ -0.72
PTCH1-221ENST00000550914 KLHL12Q53G59 568 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 FAM76BQ5HYJ3 339 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 LINC01590Q5TEZ4 76 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 C11orf88Q6PI97 169 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 ZNF788Q6ZQV5 615 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 SHFQ7M4L6 423 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms