RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 CRISP3P54108 245 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 UBE2NP61088 152 aaKnown RBP3.94□□□□□ -1.78
HCFC2-204ENST00000550335 HERVK_113P61574 105 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 GCSAMLQ5JQS6 135 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 SPAG16Q8N0X2 631 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 FAM86B1Q8N7N1 296 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 BAALCQ8WXS3 180 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 TFGQ92734 400 aaPredicted RBP3.94□□□□□ -1.78
HCFC2-204ENST00000550335 RNF170Q96K19 258 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 SLC35E1Q96K37 410 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 CHID1Q9BWS9 393 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 ARMC7Q9H6L4 198 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 SLC17A7Q9P2U7 560 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 RPS6KB2Q9UBS0 482 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 PSG8Q9UQ74 426 aa3.94□□□□□ -1.78
HCFC2-204ENST00000550335 TDRD6O60522 2096 aaKnown RBP3.94□□□□□ -1.78
HCFC2-204ENST00000550335 AGRNO00468 2067 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 TRPM7Q96QT4 1865 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 A0A1W2PRF3 423 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 A0A1W2PRM7 423 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 RAB19A4D1S5 217 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 OR6C74A6NCV1 312 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 H3BN98 237 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 SS18L1O75177 396 aaPredicted RBP3.93□□□□□ -1.78
HCFC2-204ENST00000550335 AQP8O94778 261 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 PTTG1O95997 202 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 ATF6P18850 670 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 ELK1P19419 428 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 RAB5AP20339 215 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 HOXA9P31269 272 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 CSNK1A1P48729 337 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 HCAR3P49019 387 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 ZNF136P52737 540 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 CDKN2DP55273 166 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 WNT4P56705 351 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 ZNF121P58317 390 aaPredicted RBP3.93□□□□□ -1.78
HCFC2-204ENST00000550335 TNNC1P63316 161 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 PAFAH1B2P68402 229 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 RWDD4Q6NW29 188 aaKnown RBP3.93□□□□□ -1.78
HCFC2-204ENST00000550335 OR2W3Q7Z3T1 314 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 ITPRIPQ8IWB1 547 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 GPR26Q8NDV2 337 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 OR8K3Q8NH51 312 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 NTAN1Q96AB6 310 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 ELSPBP1Q96BH3 223 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 RNF145Q96MT1 663 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 HINT2Q9BX68 163 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 SPNS1Q9H2V7 528 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 SYNDIG1Q9H7V2 258 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 ZDHHC4Q9NPG8 344 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 A0A1B0GUL6 1792 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 PAPPA2Q9BXP8 1791 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 GAKO14976 1311 aa3.93□□□□□ -1.78
HCFC2-204ENST00000550335 ZNF318Q5VUA4 2279 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 OXTP01178 125 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 HLA-DPB1P04440 258 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 CD3GP09693 182 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 RHOXF2BP0C7M4 288 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 CD37P11049 281 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 RAB3AP20336 220 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 CCNG1P51959 295 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 HADHBP55084 474 aaKnown RBP3.92□□□□□ -1.78
HCFC2-204ENST00000550335 AP1S2P56377 157 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 CLDN6P56747 220 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 CACNG7P62955 275 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 SLAQ13239 276 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 STK11Q15831 433 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 C5orf64Q2M2E5 130 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 APOBEC3HQ6NTF7 200 aaKnown RBP3.92□□□□□ -1.78
HCFC2-204ENST00000550335 TCAIMQ8N3R3 496 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 NPWQ8N729 165 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 ARIH2OSQ8N7S6 290 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 OR11H7Q8NGC8 314 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 OR5AR1Q8NGP9 310 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 RCN3Q96D15 328 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 BMFQ96LC9 184 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 GPR21Q99679 349 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 RHOXF2Q9BQY4 288 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 KIR3DX1Q9H7L2 352 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 MYOZ1Q9NP98 299 aaPredicted RBP3.92□□□□□ -1.78
HCFC2-204ENST00000550335 ISYNA1Q9NPH2 558 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 CTSFQ9UBX1 484 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 SPEF2Q9C093 1822 aa3.92□□□□□ -1.78
HCFC2-204ENST00000550335 IGLV11-55A0A075B6I3 123 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 TRBV6-6A0A0A6YYG2 114 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 ANKRD65E5RJM6 399 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 INS-IGF2F8WCM5 200 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 TMX2-CTNND1H3BSU7 103 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 ZNF861PO60384 105 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 NMT2O60551 498 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 KLK1P06870 262 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 HOXC4P09017 264 aaPredicted RBP3.91□□□□□ -1.78
HCFC2-204ENST00000550335 OR8U9P0C7N5 309 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 PGA5P0DJD9 388 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 CCNOP22674 350 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 FABP6P51161 128 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 ATP5J2P56134 94 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 TAS2R46P59540 309 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 ERCC8Q13216 396 aa3.91□□□□□ -1.78
HCFC2-204ENST00000550335 PRMT9Q6P2P2 845 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms