RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 SGK3Q96BR1 496 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 MED30Q96HR3 178 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 AJUBAQ96IF1 538 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 SSX3Q99909 188 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 IFT27Q9BW83 186 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 NSRP1Q9H0G5 558 aaKnown RBP8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 TLNRD1Q9H1K6 362 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 RANBP3Q9H6Z4 567 aaPredicted RBP8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 METTL8Q9H825 291 aaKnown RBP8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 EFCAB1Q9HAE3 211 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DCAF13Q9NV06 445 aaKnown RBP8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 HAO2Q9NYQ3 351 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DUX4Q9UBX2 424 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 SIGLEC9Q9Y336 463 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 CAPN7Q9Y6W3 813 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 H3BUX3 64 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 DIRAS1O95057 198 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 GADD45GO95257 159 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 PRB2P02812 416 aaPredicted RBP8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 NCK1P16333 377 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 PYCR1P32322 319 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 IFNGR2P38484 337 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 PRKXP51817 358 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 DLX1P56177 255 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 CAV3P56539 151 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 PRB3Q04118 309 aaPredicted RBP8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 FAM76BQ5HYJ3 339 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 SLC35F1Q5T1Q4 408 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 GLYATQ6IB77 296 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 HCP5Q6MZN7 132 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 PGBD2Q6P3X8 592 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 HACD2Q6Y1H2 254 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 ZNF788Q6ZQV5 615 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 SLC16A9Q7RTY1 509 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 DCXRQ7Z4W1 244 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 ZDHHC21Q8IVQ6 265 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 SDR9C7Q8NEX9 313 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 OR4C13Q8NGP0 309 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 OR9Q1Q8NGQ5 310 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 OR10Z1Q8NGY1 313 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 OR2T4Q8NH00 348 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 OR2T6Q8NHC8 308 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 ZNRF4Q8WWF5 429 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 SEH1LQ96EE3 360 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 FN3KQ9H479 309 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 GORASP2Q9H8Y8 452 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 SP140LQ9H930 580 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 RAB18Q9NP72 206 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 SAMD4AQ9UPU9 718 aaKnown RBP8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 FOXJ3Q9UPW0 622 aa8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 SF3B6Q9Y3B4 125 aaKnown RBP8.03□□□□□ -1.12
TRAFD1-207ENST00000550051 A0A1W2PRD5 423 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 A0A1W2PRF3 423 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 A0A1W2PRM7 423 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 ZNF593O00488 134 aaPredicted RBP8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 CDIPTO14735 213 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 XPNPEP2O43895 674 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 ACAA1P09110 424 aaPredicted RBP8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 SLC2A1P11166 492 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 PSKH1P11801 424 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 COX4I1P13073 169 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 CFL1P23528 166 aaKnown RBP8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 RPS27P42677 84 aaKnown RBP8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 SLC15A1P46059 708 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 CSNK2BP67870 215 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 TSPAN31Q12999 210 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 KLRD1Q13241 179 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 IKZF1Q13422 519 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 BLMHQ13867 455 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 TAF13Q15543 124 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 SNCBQ16143 134 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 CGB2Q6NT52 195 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 PRSS45Q7RTY3 260 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 LNX2Q8N448 690 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 PNKDQ8N490 385 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 CSNK2A3Q8NEV1 391 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 OR5T2Q8NGG2 359 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 OR52H1Q8NGJ2 320 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 OR5D13Q8NGL4 314 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 ANGPTL6Q8NI99 470 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 MRAPQ8TCY5 172 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 GNPDA2Q8TDQ7 276 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 SLAMF6Q96DU3 332 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 PYURFQ96I23 114 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 RAB3IPQ96QF0 476 aaPredicted RBP8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 KCTD14Q9BQ13 255 aaPredicted RBP8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 COPS4Q9BT78 406 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 TOR3AQ9H497 397 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 PPP1R3EQ9H7J1 279 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 VIPAS39Q9H9C1 493 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 CENPMQ9NSP4 180 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 FGFR1OP2Q9NVK5 253 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 NECAP2Q9NVZ3 263 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 IL20Q9NYY1 176 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 ABCD2Q9UBJ2 740 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 DNAJB11Q9UBS4 358 aa8.02□□□□□ -1.13
TRAFD1-207ENST00000550051 NOTCH3Q9UM47 2321 aa8.01□□□□□ -1.13
TRAFD1-207ENST00000550051 hCG_38984A0A1B0GV85 526 aa8.01□□□□□ -1.13
TRAFD1-207ENST00000550051 MEGF11A6BM72 1044 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms