RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 MAS1P04201 325 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 CD2P06729 351 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 CD37P11049 281 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 SLC2A2P11168 524 aaPredicted RBP6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF12P17014 697 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF20P17024 532 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 ATF1P18846 271 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 THBS4P35443 961 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 RORCP51449 518 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 PPP1CBP62140 327 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 NAAAQ02083 359 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 TFF3Q07654 80 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 SPOCK1Q08629 439 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 GK2Q14410 553 aaPredicted RBP6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 HLXQ14774 488 aaPredicted RBP6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF404Q494X3 552 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 C1QTNF12Q5T7M4 302 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 SFXN4Q6P4A7 337 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 CRIP3Q6Q6R5 217 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 RNF144BQ7Z419 303 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 LYPD6Q86Y78 171 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 WFDC8Q8IUA0 241 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 CCDC54Q8NEL0 328 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 OR13C9Q8NGT0 318 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 MCFD2Q8NI22 146 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 UBASH3BQ8TF42 649 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 SSC4DQ8WTU2 575 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 AKAP1Q92667 903 aaKnown RBP eCLIP6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 MUCL1Q96DR8 90 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 RGCCQ9H4X1 137 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 ZCCHC4Q9H5U6 513 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 SMURF1Q9HCE7 757 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 COQ3Q9NZJ6 369 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF391Q9UJN7 358 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 PIGLQ9Y2B2 252 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 FLNCQ14315 2725 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 A0A075B6Q4 140 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 CLEC18AA5D8T8 446 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 IFITM5A6NNB3 132 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 DHRS7CA6NNS2 312 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 CTDSP2O14595 271 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 PDCD5O14737 125 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 ZG16O60844 167 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 MTRF1O75570 445 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 PAHP00439 452 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 SOX6P35712 828 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 GNALP38405 381 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 MPV17P39210 176 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 BMXP51813 675 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 UCP2P55851 309 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 SNTB1Q13884 538 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 UBE2V2Q15819 145 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 MSMPQ1L6U9 139 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 DMRTC1Q5HYR2 192 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 SPATA46Q5T0L3 261 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 HES5Q5TA89 166 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 TMEM42Q69YG0 159 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 FAM166AQ6J272 317 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 ALKBH2Q6NS38 261 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 CLEC18BQ6UXF7 455 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 UTS2BQ765I0 119 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 KRT74Q7RTS7 529 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 MRPL21Q7Z2W9 205 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 SERPINA12Q8IW75 414 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 CLEC18CQ8NCF0 446 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 SEMA6DQ8NFY4 1073 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 OR1M1Q8NGA1 313 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 OR56B2PQ8NGI1 322 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 OR6Q1Q8NGQ2 317 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 SLC25A40Q8TBP6 338 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 ITLN2Q8WWU7 325 aaPredicted RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 RNASE6Q93091 150 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 C10orf35Q96D05 121 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 MARS2Q96GW9 593 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 ZC3HAV1LQ96H79 300 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 WFIKKN1Q96NZ8 548 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 TSC22D3Q99576 134 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 OR2J1Q9GZK6 312 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 CHST5Q9GZS9 411 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 FGF23Q9GZV9 251 aaPredicted RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 SLITRK2Q9H156 845 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 MIXL1Q9H2W2 232 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 MMP27Q9H306 513 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 PLEKHA1Q9HB21 404 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 DAPK2Q9UIK4 370 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 ERRFI1Q9UJM3 462 aaPredicted RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 A3GALT2U3KPV4 340 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 V9GY05 133 aa6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 USP9YO00507 2555 aaPredicted RBP6.95□□□□□ -1.3
DEPDC4-207ENST00000549249 CHD3Q12873 2000 aaKnown RBP6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 ANXA2P2A6NMY6 339 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 AIPO00170 330 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 SULT1B1O43704 296 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 INHBBP09529 407 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 PRF1P14222 555 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 CFL1P23528 166 aaKnown RBP6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 PAX7P23759 505 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 CD40P25942 277 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 CFPP27918 469 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 BDKRB2P30411 391 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms