RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ERLIN1O75477 346 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 SCELO95171 688 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 CTRB1P17538 263 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 RAB5AP20339 215 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 MYCNOSP40205 109 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 ELF3P78545 371 aaPredicted RBP1.3□□□□□ -2.2
CCDC38-206ENST00000548771 SP6Q3SY56 376 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 FAM131AQ6UXB0 335 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 LINC00336Q6ZUF6 198 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 SSX9Q7RTT3 188 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 SCD5Q86SK9 330 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 LUZP2Q86TE4 346 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 OR4M2Q8NGB6 313 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 HGDQ93099 445 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 TEAD3Q99594 435 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 EMC6Q9BV81 110 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 ZNF442Q9H7R0 627 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 GEMIN7Q9H840 131 aaKnown RBP1.3□□□□□ -2.2
CCDC38-206ENST00000548771 DYRK4Q9NR20 520 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 CLN8Q9UBY8 286 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 YARS2Q9Y2Z4 477 aaKnown RBP1.3□□□□□ -2.2
CCDC38-206ENST00000548771 CAB39Q9Y376 341 aaPredicted RBP1.3□□□□□ -2.2
CCDC38-206ENST00000548771 A0A075B6Q4 140 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 ARPC4-TTLL3A0A0A6YYG9 625 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 TEX46H3BTG2 121 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 CLDN34H7C241 214 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 HLA-HP01893 362 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 MAS1P04201 325 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 ZNF35P13682 527 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 GABRG2P18507 467 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 NELFEP18615 380 aaKnown RBP1.29□□□□□ -2.2
CCDC38-206ENST00000548771 SERPINB8P50452 374 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 KDSRQ06136 332 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 MEF2CQ06413 473 aaPredicted RBP1.29□□□□□ -2.2
CCDC38-206ENST00000548771 TFDP2Q14188 446 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 C6orf99Q4VX62 202 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 TMEM69Q5SWH9 247 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 MFSD14CQ5VZR4 134 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 HCP5Q6MZN7 132 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 RWDD4Q6NW29 188 aaKnown RBP1.29□□□□□ -2.2
CCDC38-206ENST00000548771 USP50Q70EL3 339 aaPredicted RBP1.29□□□□□ -2.2
CCDC38-206ENST00000548771 UNC93AQ86WB7 457 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 BBS7Q8IWZ6 715 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 ORMDL3Q8N138 153 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 LINC00469Q8N7U9 141 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 SLC25A29Q8N8R3 303 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 OR5AR1Q8NGP9 310 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 GPR21Q99679 349 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 C20orf96Q9NUD7 363 aaPredicted RBP1.29□□□□□ -2.2
CCDC38-206ENST00000548771 RBFOX1Q9NWB1 397 aaKnown RBP1.29□□□□□ -2.2
CCDC38-206ENST00000548771 TAS2R1Q9NYW7 299 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 BAHCC1Q9P281 2608 aa1.29□□□□□ -2.2
CCDC38-206ENST00000548771 PRR14LQ5THK1 2151 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 SVILO95425 2214 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 A0A0A6YYD5 115 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 CTAGE15A4D2H0 777 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 J3QRE1 110 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 IGLV2-8P01709 118 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 TRBV12-3P01733 135 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 IFNW1P05000 195 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 KRT16P08779 473 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 MMP7P09237 267 aaPredicted RBP1.28□□□□□ -2.2
CCDC38-206ENST00000548771 HRES1P13985 223 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 HLA-DMAP28067 261 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 MPIP34949 423 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 SLC1A2P43004 574 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 AP1S2P56377 157 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 PPP1CAP62136 330 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 PYDC2Q56P42 97 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 ZFAND6Q6FIF0 208 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 OR2T5Q6IEZ7 315 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 APOBEC3HQ6NTF7 200 aaKnown RBP1.28□□□□□ -2.2
CCDC38-206ENST00000548771 WDR82Q6UXN9 313 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 CTAGE6Q86UF2 777 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 NT5DC3Q86UY8 548 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 RAB43Q86YS6 212 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 SLC26A10Q8NG04 563 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 OR56A4Q8NGH8 313 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 OR2T29Q8NH02 315 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 OR52N1Q8NH53 320 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 OR52E5Q8NH55 327 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 OR51F2Q8NH61 342 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 S100PBPQ96BU1 408 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 ZBED3Q96IU2 234 aaPredicted RBP1.28□□□□□ -2.2
CCDC38-206ENST00000548771 MCUBQ9NWR8 336 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 ZNF492Q9P255 531 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 HMGXB4Q9UGU5 601 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 RAB22AQ9UL26 194 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 MROH7Q68CQ1 1323 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 ADGRA3Q8IWK6 1321 aa1.28□□□□□ -2.2
CCDC38-206ENST00000548771 KCNE1BA0A087WTH5 132 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 GOLGA6L4A6NEF3 574 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 GOLGA8JA6NMD2 632 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 CCDC169A6NNP5 214 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 C4orf51C9J302 202 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 BCKDKO14874 412 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 CACNG3O60359 315 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 FCN3O75636 299 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 TDP2O95551 362 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 NRASP01111 189 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms