RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MRAPQ8TCY5 172 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 UCN3Q969E3 161 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 COL21A1Q96P44 957 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 SIGLEC12Q96PQ1 595 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 AGMATQ9BSE5 352 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 NICN1Q9BSH3 213 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 DEFB127Q9H1M4 99 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 REEP1Q9H902 201 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 UGT1A7Q9HAW7 530 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 UGT1A8Q9HAW9 530 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 PLEKHA1Q9HB21 404 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 MARCH5Q9NX47 278 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 PAK5Q9P286 719 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 Q9UF83 564 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 TRMT112Q9UI30 125 aaKnown RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 CES1P1Q9UKY3 287 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 ST3GAL6Q9Y274 331 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 CFL2Q9Y281 166 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 PUS1Q9Y606 427 aaKnown RBP eCLIP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 SETXQ7Z333 2677 aaKnown RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 DCHS1Q96JQ0 3298 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 USP34Q70CQ2 3546 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 PHF3Q92576 2039 aaKnown RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 BDP1A6H8Y1 2624 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 WDFY4Q6ZS81 3184 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 A0A0J9YWU9 116 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 ANKRD20A5PA0PJZ0 165 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 FABP12A6NFH5 140 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 E7ENQ6 273 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 MKRN2OSH3BPM6 223 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 SMLR1H3BR10 107 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 EMC8O43402 210 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 UTS2O95399 124 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 C6orf47O95873 294 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 IGHV3-13P01766 116 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 PET100P0DJ07 73 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 CD37P11049 281 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 USF1P22415 310 aaPredicted RBP3.18□□□□□ -1.9
SCAF11-210ENST00000547654 HRH1P35367 487 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 MDH2P40926 338 aaKnown RBP3.18□□□□□ -1.9
SCAF11-210ENST00000547654 RND2P52198 227 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 APOC4P55056 127 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF121P58317 390 aaPredicted RBP3.18□□□□□ -1.9
SCAF11-210ENST00000547654 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF45Q02386 682 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 IFFO1Q0D2I5 559 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 EGFEM1PQ0D2K5 195 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 SLAMF1Q13291 335 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 NSDHLQ15738 373 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 POU2AF1Q16633 256 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 LRRC10Q5BKY1 277 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 COA6Q5JTJ3 125 aaKnown RBP3.18□□□□□ -1.9
SCAF11-210ENST00000547654 RESP18Q5W5W9 173 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 APOBEC3HQ6NTF7 200 aaKnown RBP3.18□□□□□ -1.9
SCAF11-210ENST00000547654 SSX7Q7RTT5 188 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 LRRC6Q86X45 466 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 ZFP41Q8N8Y5 198 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 CCDC54Q8NEL0 328 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 ZFP90Q8TF47 636 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 LRRC29Q8WV35 223 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 ANP32BQ92688 251 aaKnown RBP3.18□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF75AQ96N20 296 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 UQCC2Q9BRT2 126 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 DCUN1D5Q9BTE7 237 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 GABARAPL3Q9BY60 117 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 GNB4Q9HAV0 340 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 SIRT7Q9NRC8 400 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 RHBDL2Q9NX52 303 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 CLCF1Q9UBD9 225 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 C4AP0C0L4 1744 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 C4BP0C0L5 1744 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 CEP162Q5TB80 1403 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 FER1L6Q2WGJ9 1857 aa3.18□□□□□ -1.9
SCAF11-210ENST00000547654 CIB4A0PJX0 185 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 TMEM213A2RRL7 107 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 GOLGA8IPA6NC78 632 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 SULT1C2O00338 296 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 SLC31A2O15432 143 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 B4GALT5O43286 388 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 SERF1AO75920 110 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 TIMP1P01033 207 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OXTP01178 125 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 GLAP06280 429 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 EIF4EP06730 217 aaKnown RBP3.17□□□□□ -1.9
SCAF11-210ENST00000547654 RETP07949 1114 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 SLC35E2BP0CK96 405 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 RD3LP0DJH9 198 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OR5H8P0DN80 308 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ICAM2P13598 275 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 IGFBP3P17936 291 aaPredicted RBP3.17□□□□□ -1.9
SCAF11-210ENST00000547654 WARSP23381 471 aaKnown RBP3.17□□□□□ -1.9
SCAF11-210ENST00000547654 BTCP35070 178 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 PFN2P35080 140 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 MAGEA6P43360 314 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 PPICP45877 212 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 PRLHRP49683 370 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 VSX2P58304 361 aaPredicted RBP3.17□□□□□ -1.9
SCAF11-210ENST00000547654 MYL6P60660 151 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 RPS21P63220 83 aaKnown RBP3.17□□□□□ -1.9
SCAF11-210ENST00000547654 STX4Q12846 297 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms