RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TRIP6Q15654 476 aaKnown RBP11.16□□□□□ -0.62
SCAF11-209ENST00000547018 KISS1Q15726 138 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 CD276Q5ZPR3 534 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-209ENST00000547018 GCNT2Q8N0V5 402 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 RAB3CQ96E17 227 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 AKAP6Q13023 2319 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 PLCE1Q9P212 2302 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 IGLV3-32A0A0A0MS00 114 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 WIPF3A6NGB9 483 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 PMS2P2O95744 297 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF17P17021 662 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 IGFBP3P17936 291 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-209ENST00000547018 SRD5A2P31213 254 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 ACTBP60709 375 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 ACTG1P63261 375 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 ARG2P78540 354 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 H3F3AP84243 136 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 UBE2V2Q15819 145 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 ELFN2Q5R3F8 820 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 MCEMP1Q8IX19 187 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 C9orf62Q8N4C0 152 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 LILRB4Q8NHJ6 448 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 LYZL4Q96KX0 146 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 CLEC4MQ9H2X3 399 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-209ENST00000547018 HLA-AP01891 365 aaKnown RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 CD63P08962 238 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 GRK1Q15835 563 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 LGALSLQ3ZCW2 172 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 DEGS2Q6QHC5 323 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 GLDNQ6ZMI3 551 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 HDDC2Q7Z4H3 204 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 C6orf201Q7Z4U5 140 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 OR5AS1Q8N127 324 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF629Q9UEG4 869 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 SPTBN1Q01082 2364 aaKnown RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 INTS1Q8N201 2190 aaKnown RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 KNG1P01042 644 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 GP1BAP07359 652 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 PGAM2P15259 253 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 ACKR3P25106 362 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 TAS2R19P59542 299 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 PNLDC1Q8NA58 520 aaKnown RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 OR2M7Q8NG81 312 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 GPX8Q8TED1 209 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 FOXB1Q99853 325 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 C7orf50Q9BRJ6 194 aaKnown RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 MRI1Q9BV20 369 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 TMPRSS13Q9BYE2 586 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 PNRC2Q9NPJ4 139 aaKnown RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 COQ3Q9NZJ6 369 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 UPB1Q9UBR1 384 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 RAB22AQ9UL26 194 aa11.15□□□□□ -0.62
SCAF11-209ENST00000547018 BOKQ9UMX3 212 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-209ENST00000547018 A0A087WZY1 265 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 NEURL1O76050 574 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 HPP00738 406 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 CSRP1P21291 193 aaKnown RBP11.15□□□□□ -0.63
SCAF11-209ENST00000547018 DUSP1P28562 367 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 OR3A3P47888 321 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 OR3A2P47893 321 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 H2BFSP57053 126 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 MRPS10P82664 201 aaKnown RBP11.15□□□□□ -0.63
SCAF11-209ENST00000547018 HGFACQ04756 655 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 SLC9A3R2Q15599 337 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 SPATA46Q5T0L3 261 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 HACD4Q5VWC8 232 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 CDH24Q86UP0 819 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 GGNQ86UU5 652 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 BOLLQ8N9W6 283 aaKnown RBP11.15□□□□□ -0.63
SCAF11-209ENST00000547018 MARCH1Q8TCQ1 289 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 SPTSSAQ969W0 71 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 PNPLA2Q96AD5 504 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 SCP2D1Q9UJQ7 156 aa11.15□□□□□ -0.63
SCAF11-209ENST00000547018 ZGRF1Q86YA3 2104 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 ABCA4P78363 2273 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 L7N2F9 121 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 WISP2O76076 250 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 CFDP00746 253 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-209ENST00000547018 CSTBP04080 98 aaKnown RBP11.14□□□□□ -0.63
SCAF11-209ENST00000547018 IL32P24001 234 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 RBMXP38159 391 aaKnown RBP11.14□□□□□ -0.63
SCAF11-209ENST00000547018 RRADP55042 308 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 CAMK2BQ13554 666 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 BCL2A1Q16548 175 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 PCK2Q16822 640 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 ALKAL2Q6UX46 152 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 SKA3Q8IX90 412 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 THRSPQ92748 146 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 ARL6Q9H0F7 186 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 RANBP3Q9H6Z4 567 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-209ENST00000547018 SLC7A10Q9NS82 523 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 PCDHGA1Q9Y5H4 931 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 NAP1L6A6NFF2 107 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 GJE1A6NN92 205 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 VAMP5O95183 116 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 ISG15P05161 165 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 SULT1A3P0DMM9 295 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 SULT1A4P0DMN0 295 aa11.14□□□□□ -0.63
SCAF11-209ENST00000547018 AMY2BP19961 511 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms