RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 TPD52L3Q96J77 140 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 ADGRG7Q96K78 797 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 FRG2BQ96QU4 278 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 MTERF1Q99551 399 aaKnown RBP5.71□□□□□ -1.5
CCDC60-205ENST00000546345 EGFL8Q99944 293 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 TSSK6Q9BXA6 273 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 RTN4RQ9BZR6 473 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 HDHD2Q9H0R4 259 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 PLEKHA1Q9HB21 404 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 NANSQ9NR45 359 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 PPP1R14DQ9NXH3 145 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 VPS29Q9UBQ0 182 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 UTS2RQ9UKP6 389 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 COPS3Q9UNS2 423 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 SPACA6W5XKT8 324 aa5.71□□□□□ -1.5
CCDC60-205ENST00000546345 TRAV1-2A0A0B4J238 106 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 PLSCR5A0PG75 271 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 GLOD5A6NK44 160 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 LRRN3E7EW58 273 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 SELENOFO60613 162 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 TSC22D2O75157 780 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 SH3BGRLO75368 114 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 IL3P08700 152 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 UBBP0CG47 229 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 UBCP0CG48 685 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 FOLR2P14207 255 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF250P15622 560 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 RPA2P15927 270 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 EPORP19235 508 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 POU1F1P28069 291 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 GALNSP34059 522 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 MTNR1AP48039 350 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 MEOX2P50222 304 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 SNRPD2P62316 118 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 RPS27AP62979 156 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 UBA52P62987 128 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 CDK5Q00535 292 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 SSBP1Q04837 148 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 ACSM2AQ08AH3 577 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 PLCXD2Q0VAA5 305 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 BTN1A1Q13410 526 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 SCARB2Q14108 478 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF345Q14585 488 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 HLXQ14774 488 aaPredicted RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 LBHQ53QV2 105 aaPredicted RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 ENTPD8Q5MY95 495 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 LIPKQ5VXJ0 399 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 ACSM2BQ68CK6 577 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 REEP3Q6NUK4 255 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 LPCAT3Q6P1A2 487 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 CHMP1BQ7LBR1 199 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 NUP54Q7Z3B4 507 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 NUFIP2Q7Z417 695 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 VTCN1Q7Z7D3 282 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 GID4Q8IVV7 300 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 RNF175Q8N4F7 328 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 SYT14Q8NB59 555 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 AQP11Q8NBQ7 271 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 OR2M3Q8NG83 312 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 OR11H7Q8NGC8 314 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 OR52I1Q8NGK6 324 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 OR8D4Q8NGM9 314 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 OR2T35Q8NGX2 323 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 OR52P1PQ8NH57 321 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 HSD17B8Q92506 261 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 SLC9A6Q92581 669 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 TAF15Q92804 592 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 MRPL48Q96GC5 212 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 RBM18Q96H35 190 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF607Q96SK3 696 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 NPAS1Q99742 590 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF251Q9BRH9 671 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 WACQ9BTA9 647 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 DPCDQ9BVM2 203 aaPredicted RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 FAIM2Q9BWQ8 316 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 C1QTNF5Q9BXJ0 243 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 ACPTQ9BZG2 426 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 POLR2J3Q9H1A7 115 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 EVA1AQ9H8M9 152 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 NMNAT1Q9HAN9 279 aaPredicted RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 NGBQ9NPG2 151 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 TMEM138Q9NPI0 162 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 KRCC1Q9NPI7 259 aaPredicted RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 MAN2C1Q9NTJ4 1040 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 MED29Q9NX70 200 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 TAS2R8Q9NYW2 309 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 COMMD3Q9UBI1 195 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 MLXQ9UH92 298 aa5.7□□□□□ -1.5
CCDC60-205ENST00000546345 EXOGQ9Y2C4 368 aaKnown RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 SPIN1Q9Y657 262 aaPredicted RBP5.7□□□□□ -1.5
CCDC60-205ENST00000546345 DNAH3Q8TD57 4116 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 LOC390937A0A1W2PQ73 354 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SLC22A23A1A5C7 686 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF814B7Z6K7 855 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 PRR23D1E9PI22 279 aaPredicted RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 F5H697 171 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 FOXE1O00358 373 aaPredicted RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SAP18O00422 153 aaKnown RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 PLPP1O14494 284 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms