RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 AGAP6Q5VW22 663 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 LIPNQ5VXI9 398 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MBNL2Q5VZF2 373 aaKnown RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 C11orf71Q6IPW1 123 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 FBXW12Q6X9E4 464 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 PRSS45Q7RTY3 260 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MRPL21Q7Z2W9 205 aaKnown RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 LHFPL3Q86UP9 236 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 NAA40Q86UY6 237 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 SYS1Q8N2H4 156 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 STX19Q8N4C7 294 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF540Q8NDQ6 660 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 OR8B12Q8NGG6 310 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 OR52N1Q8NH53 320 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 OR2AE1Q8NHA4 323 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 SYNPRQ8TBG9 265 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 KLF14Q8TD94 323 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 IGFBPL1Q8WX77 278 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 SGCDQ92629 289 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 RORBQ92753 470 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 GGHQ92820 318 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 PELI1Q96FA3 418 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MARS2Q96GW9 593 aaKnown RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 TMEM80Q96HE8 168 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 PGAM5Q96HS1 289 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 LURAP1Q96LR2 239 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MYCBPQ99417 103 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF649Q9BS31 505 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 TRAF4Q9BUZ4 470 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 OR10A2Q9H208 303 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 LIME1Q9H400 295 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 RGCCQ9H4X1 137 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 SP140LQ9H930 580 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 DYNLRB1Q9NP97 96 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 TUBG2Q9NRH3 451 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 CBLN4Q9NTU7 201 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 SCN3BQ9NY72 215 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 UBAP1Q9NZ09 502 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MYEF2Q9P2K5 600 aaKnown RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 NUFIP1Q9UHK0 495 aaKnown RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ST6GALNAC2Q9UJ37 374 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 LAMP3Q9UQV4 416 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 PLEKHA6Q9Y2H5 1048 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 LRCH1Q9Y2L9 728 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 STARD10Q9Y365 291 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 TPRKBQ9Y3C4 175 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 N6AMT1Q9Y5N5 214 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF469Q96JG9 3925 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 A0A0U1RQV5 110 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 hCG_38984A0A1B0GV85 526 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 TMEM129A0AVI4 362 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 VSTM5A8MXK1 200 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 B9A039 149 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 PTGES3LE9PB15 166 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 J3QLW9 94 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 RGS10O43665 173 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 TIMM8AO60220 97 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CLPTM1O96005 669 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 PNPP00491 289 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 IGHV3-13P01766 116 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 TTRP02766 147 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 MT-ND2P03891 347 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 MT-ND5P03915 603 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CDK1P06493 297 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 TACSTD2P09758 323 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 UBCP0CG48 685 aaKnown RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF19P17023 458 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CFL1P23528 166 aaKnown RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 C21orf33P30042 268 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 PSMB10P40306 273 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 ALDH3B1P43353 468 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 EVX1P49640 407 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 PPOXP50336 477 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 OR12D2P58182 307 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 SELENOVP59797 346 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 GABARAPL2P60520 117 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF92Q03936 586 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 MRPL28Q13084 256 aaKnown RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 ZMAT1Q5H9K5 638 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 WDR38Q5JTN6 314 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 RBM48Q5RL73 367 aaKnown RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 OR2G6Q5TZ20 316 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 TMPRSS11AQ6ZMR5 421 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 PGAP1Q75T13 922 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 KCTD20Q7Z5Y7 419 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 LRP11Q86VZ4 500 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 COMMD2Q86X83 199 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CATSPERDQ86XM0 798 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 BHLHE23Q8NDY6 225 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 OR56B2PQ8NGI1 322 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 HAVCR2Q8TDQ0 301 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 NINJ1Q92982 152 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 MYDGFQ969H8 173 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 SPSB4Q96A44 273 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 REEP6Q96HR9 211 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 SIGLEC11Q96RL6 698 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 SSBP3Q9BWW4 388 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-211ENST00000546304 CACNG6Q9BXT2 260 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
PRKDC-211ENST00000546304 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms