RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 GSG1Q2KHT4 349 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 OR52B4Q8NGK2 314 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 ARSGQ96EG1 525 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 PHYHIPLQ96FC7 376 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 CXorf58Q96LI9 332 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 S1PR3Q99500 378 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 PLA2G2FQ9BZM2 168 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 FAM234AQ9H0X4 552 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 DEFB127Q9H1M4 99 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 RRP8O43159 456 aaKnown RBP11.23□□□□□ -0.61
COL4A6-209ENST00000545689 DHRS3O75911 302 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 IL2RAP01589 272 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 WNT1P04628 370 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 OPRM1P35372 400 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 SMIM21Q3B7S5 101 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 FAHD2BQ6P2I3 314 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-209ENST00000545689 TRILQ7L0X0 811 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 OR5AP2Q8NGF4 316 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 OR1L3Q8NH93 324 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 FAHD2AQ96GK7 314 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 TIMD4Q96H15 378 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 FOXQ1Q9C009 403 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 OR5V1Q9UGF6 321 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF107Q9UII5 783 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-209ENST00000545689 GAB2Q9UQC2 676 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 ANKRD20A5PA0PJZ0 165 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 TNFSF14O43557 240 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 S100A8P05109 93 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 FAM219BQ5XKK7 198 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 BTLAQ7Z6A9 289 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 MITD1Q8WV92 249 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 HPSE2Q8WWQ2 592 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 EPPINO95925 133 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 KCNJ3P48549 501 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 GUCA2AQ02747 115 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 RNPS1Q15287 305 aaKnown RBP11.23□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 TRIB1Q96RU8 372 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
COL4A6-209ENST00000545689 CCDC187A0A096LP49 1063 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 SFT2D2O95562 160 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 EIF3IQ13347 325 aaKnown RBP11.22□□□□□ -0.61
COL4A6-209ENST00000545689 OR2A2Q6IF42 318 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 LSMEM1Q8N8F7 131 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 RDH5Q92781 318 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 UCK1Q9HA47 277 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 CRLF2Q9HC73 371 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 WNT16Q9UBV4 365 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 RCL1Q9Y2P8 373 aaKnown RBP11.22□□□□□ -0.61
COL4A6-209ENST00000545689 DCTN6O00399 190 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 PLPP3O14495 311 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 CRYAAP02489 173 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 FAHP16930 419 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 PTAFRP25105 342 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 MDH2P40926 338 aaKnown RBP11.22□□□□□ -0.61
COL4A6-209ENST00000545689 OR4C3Q8NH37 302 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 FBXW5Q969U6 566 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 ORAI1Q96D31 301 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 RPH3ALQ9UNE2 315 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 TMED3Q9Y3Q3 217 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 IGHV1OR21-1A0A087WYE8 117 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 ABCD4O14678 606 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 CST4P01036 141 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 SPANXN5Q5MJ07 72 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 ADGRG3Q86Y34 549 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 OR8D4Q8NGM9 314 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
COL4A6-209ENST00000545689 PIK3IP1Q96FE7 263 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 SOX7Q9BT81 388 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 HMSDA8MTL9 139 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 PRRG2O14669 202 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 CPN1P15169 458 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 GZMMP51124 257 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 ST3GAL2Q16842 350 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 CEACAM16Q2WEN9 425 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 GNG13Q9P2W3 67 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 MTCH2Q9Y6C9 303 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 TRIM77I1YAP6 450 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 INSM1Q01101 510 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-209ENST00000545689 ENDOGQ14249 297 aaKnown RBP11.22□□□□□ -0.61
COL4A6-209ENST00000545689 BTNL8Q6UX41 500 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 SKA3Q8IX90 412 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-209ENST00000545689 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-209ENST00000545689 PLSCR3Q9NRY6 295 aa11.22□□□□□ -0.61
COL4A6-209ENST00000545689 LGALS4P56470 323 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 FAM162BQ5T6X4 162 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 Q7L0L9 218 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 NUBPLQ8TB37 319 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF275Q9NSD4 429 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-209ENST00000545689 COL4A1P02462 1669 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 WDR1O75083 606 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 PGA3P0DJD8 388 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
COL4A6-209ENST00000545689 H3F3AP84243 136 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms