RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SIGLEC5O15389 551 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 SYNGR1O43759 233 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 NDUFB2O95178 105 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
CHD4-212ENST00000545083 CHRM2P08172 466 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 CCDC159P0C7I6 412 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 SLC2A1P11166 492 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 POU1F1P28069 291 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 GRK5P34947 590 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 VDAC2P45880 294 aaPredicted RBP7.55□□□□□ -1.2
CHD4-212ENST00000545083 GSK3BP49841 420 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 ERVFRD-1P60508 538 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 MXRA7P84157 204 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 BLMHQ13867 455 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 TRAM2Q15035 370 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 LRRC23Q53EV4 343 aaPredicted RBP7.55□□□□□ -1.2
CHD4-212ENST00000545083 LDLRAD2Q5SZI1 272 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 NANOGP8Q6NSW7 305 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 PGM2L1Q6PCE3 622 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 ADCK1Q86TW2 530 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 C11orf42Q8N5U0 333 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 OR5D13Q8NGL4 314 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 OR8S1Q8NH09 359 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 MYDGFQ969H8 173 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 TPD52L3Q96J77 140 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 RAB3IPQ96QF0 476 aaPredicted RBP7.55□□□□□ -1.2
CHD4-212ENST00000545083 GPX7Q96SL4 187 aaPredicted RBP7.55□□□□□ -1.2
CHD4-212ENST00000545083 FNDC11Q9BVV2 318 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 CHID1Q9BWS9 393 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 DNTTIP1Q9H147 329 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 CYB5R1Q9UHQ9 305 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 SIGLEC7Q9Y286 467 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 LCE6AA0A183 80 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 TCRBV4S1A1TA0A5B7 111 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 FAM90A8PA6NJQ4 464 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 ANGPT2O15123 496 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 ATP8B1O43520 1251 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 TXNDC12O95881 172 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 PSKH1P11801 424 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 JUNBP17275 347 aaPredicted RBP7.54□□□□□ -1.2
CHD4-212ENST00000545083 COX7A1P24310 79 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 CRABP1P29762 137 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 OTX1P32242 354 aaPredicted RBP7.54□□□□□ -1.2
CHD4-212ENST00000545083 RPS27P42677 84 aaKnown RBP7.54□□□□□ -1.2
CHD4-212ENST00000545083 CAV3P56539 151 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 MZT1Q08AG7 82 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 DMRTC1Q5HYR2 192 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 C10orf99Q6UWK7 81 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 ZNF730Q6ZMV8 503 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 RNF113BQ8IZP6 322 aaKnown RBP7.54□□□□□ -1.2
CHD4-212ENST00000545083 FAM185AQ8N0U4 392 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 OR2AJ1Q8NGZ0 328 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 ANGPTL6Q8NI99 470 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 MUC7Q8TAX7 377 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 FAM46AQ96IP4 442 aaKnown RBP7.54□□□□□ -1.2
CHD4-212ENST00000545083 ASCL2Q99929 193 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 TLNRD1Q9H1K6 362 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 C19orf12Q9NSK7 152 aa7.54□□□□□ -1.2
CHD4-212ENST00000545083 MRPL22Q9NWU5 206 aaKnown RBP7.54□□□□□ -1.2
CHD4-212ENST00000545083 FXYD1O00168 92 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 ACAA1P09110 424 aaPredicted RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 IFNA8P32881 189 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 NAA10P41227 235 aaPredicted RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 PRKXP51817 358 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 DCTN2Q13561 401 aaKnown RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 ARSJQ5FYB0 599 aaPredicted RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 DNM1P34Q6PK57 102 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 VTCN1Q7Z7D3 282 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 MRPL41Q8IXM3 137 aaKnown RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 ZNF454Q8N9F8 522 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 ZNRF1Q8ND25 227 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 RPL3LQ92901 407 aaKnown RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 SPTSSAQ969W0 71 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 SPSB4Q96A44 273 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 MED30Q96HR3 178 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 C7orf26Q96N11 449 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 NMNAT3Q96T66 252 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 FN3KQ9H479 309 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 N6AMT1Q9Y5N5 214 aa7.53□□□□□ -1.2
CHD4-212ENST00000545083 TSSC4Q9Y5U2 329 aaPredicted RBP7.53□□□□□ -1.2
CHD4-212ENST00000545083 IGKV1D-17A0A075B6S4 117 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 ANKRD30BLA7E2S9 258 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 H0YHG0 523 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 AKR7A2O43488 359 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 IFNA14P01570 189 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 TROVE2P10155 538 aaKnown RBP eCLIP7.52□□□□□ -1.21
CHD4-212ENST00000545083 CCL3L1P16619 93 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 LMO1P25800 156 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 KDELR2P33947 212 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 LGALS4P56470 323 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 SELENOWP63302 87 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 FAM3AP98173 230 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 DOC2BQ14184 412 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 SLC36A3Q495N2 470 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 KLHL12Q53G59 568 aa7.52□□□□□ -1.21
CHD4-212ENST00000545083 KLHL22Q53GT1 634 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms