RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	NRAS	P01111	189 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	CD2	P06729	351 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	CPE	P16870	476 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	MAGEB1	P43366	347 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	PPOX	P50336	477 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	MMP15	P51511	669 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	TNFAIP6	P98066	277 aa	Predicted RBP	8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	MZT1	Q08AG7	82 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	PRDX4	Q13162	271 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	CLVS2	Q5SYC1	327 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	PLCXD3	Q63HM9	321 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	PAMR1	Q6UXH9	720 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	PLPP7	Q8NBV4	271 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR10AD1	Q8NGE0	317 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR13C5	Q8NGS8	318 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	ELMOD3	Q96FG2	381 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	TRMT61A	Q96FX7	289 aa	Known RBP	8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	PGLYRP3	Q96LB9	341 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	LURAP1	Q96LR2	239 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	DIRC2	Q96SL1	478 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	MICU1	Q9BPX6	476 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	SLC30A2	Q9BRI3	323 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	ADAT1	Q9BUB4	502 aa	Known RBP	8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	MRPS26	Q9BYN8	205 aa	Known RBP	8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	EGLN1	Q9GZT9	426 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	GPR173	Q9NS66	373 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF275	Q9NSD4	429 aa	Predicted RBP	8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	NKIRAS2	Q9NYR9	191 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	MPC1	Q9Y5U8	109 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	HEATR1	Q9H583	2144 aa	Known RBP	8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	HECTD1	Q9ULT8	2610 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	IGHV3-64D	A0A0J9YX35	117 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545		A0A1W2PPK0	400 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	ANKRD61	A6NGH8	418 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	DHRS7C	A6NNS2	312 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545		F5H5P2	479 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545		H0YL77	283 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	CCRL2	O00421	344 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	GMDS	O60547	372 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	GATB	O75879	557 aa	Known RBP	8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	CST4	P01036	141 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	IGHV1-46	P01743	117 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	CD1A	P06126	327 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	CD53	P19397	219 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	SRP9	P49458	86 aa	Known RBP	8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	RPS25	P62851	125 aa	Known RBP	8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	CCL8	P80075	99 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	TNK1	Q13470	666 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	TRAM1	Q15629	374 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	PCGF3	Q3KNV8	242 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545		Q499Y3	187 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	ACSM3	Q53FZ2	586 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	DMRTC1	Q5HYR2	192 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	CEP78	Q5JTW2	689 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZBTB37	Q5TC79	503 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	C11orf71	Q6IPW1	123 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545		Q6ZR03	302 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	CEACAM19	Q7Z692	300 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	PHC2	Q8IXK0	858 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZDHHC23	Q8IYP9	409 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	SPERT	Q8NA61	448 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	RPS4Y2	Q8TD47	263 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	RGP1	Q92546	391 aa	Predicted RBP	8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	DVL3	Q92997	716 aa	Predicted RBP	8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	MUL1	Q969V5	352 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	C10orf35	Q96D05	121 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	ADAT3	Q96EY9	351 aa	Predicted RBP	8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	RNF170	Q96K19	258 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR14A2	Q96R54	314 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	ABCB9	Q9NP78	766 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	C14orf119	Q9NWQ9	140 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	CKLF	Q9UBR5	152 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	SCOC	Q9UIL1	159 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	SLC7A11	Q9UPY5	501 aa		8.65	□□□□□ -1.02
CPSF7-221	ENST00000543545	PTPN13	Q12923	2485 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	ZNF879	B4DU55	563 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	RGS9	O75916	674 aa	Predicted RBP	8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	GRP	P07492	148 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	SMIM18	P0DKX4	95 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	PSMA1	P25786	263 aa	Known RBP	8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	MAPK3	P27361	379 aa	Predicted RBP	8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	ATP5J2	P56134	94 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	PPP3R1	P63098	170 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	SSX1	Q16384	188 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	CARTPT	Q16568	116 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	SYT6	Q5T7P8	510 aa	Predicted RBP	8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	SERPINA12	Q8IW75	414 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	OR5D14	Q8NGL3	314 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	NPRL2	Q8WTW4	380 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	NEU4	Q8WWR8	484 aa	Predicted RBP	8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	PP6455	Q8WZ26	134 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	THRSP	Q92748	146 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	TMEM106A	Q96A25	262 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	PERP	Q96FX8	193 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	RTL8A	Q9BWD3	113 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	CHST5	Q9GZS9	411 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	CXXC4	Q9H2H0	198 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	ZCCHC4	Q9H5U6	513 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	PPP1R3E	Q9H7J1	279 aa		8.64	□□□□□ -1.03
CPSF7-221	ENST00000543545	NEK6	Q9HC98	313 aa		8.64	□□□□□ -1.03

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms