RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CCR9P51686 369 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 GTF2A1P52655 376 aaPredicted RBP5.37□□□□□ -1.55
LTBR-212ENST00000543542 CDH15P55291 814 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 DSCR9P59020 149 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 TAS2R43P59537 309 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 NANOS3P60323 173 aaKnown RBP5.37□□□□□ -1.55
LTBR-212ENST00000543542 SLC35A2P78381 396 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 OR8B8Q15620 311 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 CCDC58Q4VC31 144 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 CEP78Q5JTW2 689 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 PLCXD3Q63HM9 321 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 PEG10Q86TG7 708 aaKnown RBP5.37□□□□□ -1.55
LTBR-212ENST00000543542 MOGAT3Q86VF5 341 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 EGFL6Q8IUX8 553 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 RDH10Q8IZV5 341 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 SVOPQ8N4V2 548 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 NANOGP1Q8N7R0 232 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 ZFP41Q8N8Y5 198 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 SPERTQ8NA61 448 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 OR11L1Q8NGX0 322 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 IGFBPL1Q8WX77 278 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 CCL17Q92583 94 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 RDH5Q92781 318 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 RNF170Q96K19 258 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 MEGF10Q96KG7 1140 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 PDCD1LG2Q9BQ51 273 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 SOX7Q9BT81 388 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 RTL8AQ9BWD3 113 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 YTHDF1Q9BYJ9 559 aaKnown RBP5.37□□□□□ -1.55
LTBR-212ENST00000543542 CXXC4Q9H2H0 198 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 ABCB9Q9NP78 766 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 GPR173Q9NS66 373 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 UFSP2Q9NUQ7 469 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 FKBP14Q9NWM8 211 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 PAK1IP1Q9NWT1 392 aaPredicted RBP5.37□□□□□ -1.55
LTBR-212ENST00000543542 UBAP1Q9NZ09 502 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 IL19Q9UHD0 177 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 HHLA2Q9UM44 414 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 SLC7A11Q9UPY5 501 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 DHDHQ9UQ10 334 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 PPP1R3CQ9UQK1 317 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 RHBDD3Q9Y3P4 386 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 PCDHGB5Q9Y5G0 923 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 MPC1Q9Y5U8 109 aa5.37□□□□□ -1.55
LTBR-212ENST00000543542 ANKRD17O75179 2603 aaKnown RBP5.37□□□□□ -1.55
LTBR-212ENST00000543542 A0A1B0GTI1 187 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 FAM230AA0A1W2PPH8 454 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 LOC390937A0A1W2PQ73 354 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 ISPDA4D126 451 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 LRRC30A6NM36 301 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CLDN25C9JDP6 229 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 E9PI62 339 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 SMAD7O15105 426 aaKnown RBP5.36□□□□□ -1.55
LTBR-212ENST00000543542 PPIHO43447 177 aaKnown RBP5.36□□□□□ -1.55
LTBR-212ENST00000543542 GATBO75879 557 aaKnown RBP5.36□□□□□ -1.55
LTBR-212ENST00000543542 CST4P01036 141 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CD2P06729 351 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CD55P08174 381 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 ADH4P08319 380 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CELP19835 753 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 COL8A2P25067 703 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 ACKR3P25106 362 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CRYBB2P43320 205 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 MAP2K4P45985 399 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 GPR6P46095 362 aaPredicted RBP5.36□□□□□ -1.55
LTBR-212ENST00000543542 SOX2P48431 317 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 GABARAPL2P60520 117 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CDK5R1Q15078 307 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 SPHARQ15513 63 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CLVS2Q5SYC1 327 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 ZBTB37Q5TC79 503 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 PRAMEF6Q5VXH4 476 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 XAF1Q6GPH4 301 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 FDX2Q6P4F2 183 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 PRSS57Q6UWY2 283 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 PRSS48Q7RTY5 328 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 C1orf87Q8N0U7 546 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 BOLLQ8N9W6 283 aaKnown RBP5.36□□□□□ -1.55
LTBR-212ENST00000543542 WFDC11Q8NEX6 87 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 OR14K1Q8NGZ2 314 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 ZNF420Q8TAQ5 688 aaPredicted RBP5.36□□□□□ -1.55
LTBR-212ENST00000543542 TRMT10AQ8TBZ6 339 aaKnown RBP5.36□□□□□ -1.55
LTBR-212ENST00000543542 GPR148Q8TDV2 347 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 NPRL2Q8WTW4 380 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 SGCDQ92629 289 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 UFD1Q92890 307 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 HPS1Q92902 700 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 RAB1CQ92928 201 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 ITFG2Q969R8 447 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 FGGYQ96C11 551 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 SMIM19Q96E16 107 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 TIMD4Q96H15 378 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 ZNF649Q9BS31 505 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CDCA4Q9BXL8 241 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 DUSP21Q9H596 190 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 NARFLQ9H6Q4 476 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 CHODLQ9H9P2 273 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 FN3KRPQ9HA64 309 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 NEK6Q9HC98 313 aa5.36□□□□□ -1.55
LTBR-212ENST00000543542 DLL4Q9NR61 685 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms