RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 GABRA3P34903 492 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 NAA10P41227 235 aaPredicted RBP10.09□□□□□ -0.79
CDH4-201ENST00000543233 TAS2R43P59537 309 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 ACTBP60709 375 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 ACTG1P63261 375 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 MLC1Q15049 377 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 FAM180AQ6UWF9 173 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 TMEM64Q6YI46 380 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 ZAR1Q86SH2 424 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 COMMD1Q8N668 190 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 CYB561A3Q8NBI2 242 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 OR5T1Q8NG75 326 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 OR9A4Q8NGU2 314 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 SLC37A2Q8TED4 501 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 FGF11Q92914 225 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 OR2J1Q9GZK6 312 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 BCL2L10Q9HD36 194 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 CHST11Q9NPF2 352 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 CD207Q9UJ71 328 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 PITPNC1Q9UKF7 332 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 ZNF443Q9Y2A4 671 aaPredicted RBP10.09□□□□□ -0.79
CDH4-201ENST00000543233 ZFP30Q9Y2G7 519 aa10.09□□□□□ -0.79
CDH4-201ENST00000543233 MUC22E2RYF6 1773 aaPredicted RBP10.08□□□□□ -0.8
CDH4-201ENST00000543233 TRAV1-2A0A0B4J238 106 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 TRBV2A0A0J9YWF9 115 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.08□□□□□ -0.8
CDH4-201ENST00000543233 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.08□□□□□ -0.8
CDH4-201ENST00000543233 H7C417 338 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 CCL25O15444 150 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 CT62P0C5K7 136 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 CTSEP14091 401 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 CPMP14384 443 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 PSMB10P40306 273 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 CAMLGP49069 296 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 COL5A1-AS1Q5SY13 56 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 PWWP2BQ6NUJ5 590 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 TMPRSS12Q86WS5 348 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 DIO2Q92813 273 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 PGAM5Q96HS1 289 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 FAM210BQ96KR6 192 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 PGLYRP3Q96LB9 341 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 OR5B2Q96R09 309 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 PHB2Q99623 299 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 GPR174Q9BXC1 333 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 C20orf141Q9NUB4 165 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 MTFP1Q9UDX5 166 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 UNC13CQ8NB66 2214 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 A0A1B0GTI1 187 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 ZNF264O43296 627 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 GCGP01275 180 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 GYPBP06028 91 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 RAB40ALP0C0E4 278 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 PGGHGQ32M88 737 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 MRPL2Q5T653 305 aaKnown RBP10.08□□□□□ -0.8
CDH4-201ENST00000543233 SLC35E3Q7Z769 313 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 BIVMQ86UB2 503 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 GKN2Q86XP6 184 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 PAQR4Q8N4S7 273 aaPredicted RBP10.08□□□□□ -0.8
CDH4-201ENST00000543233 OR4C5Q8NGB2 326 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 RAB40AQ8WXH6 277 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 HAVCR1Q96D42 359 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 GABRG3Q99928 467 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 ZFYVE21Q9BQ24 234 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 FAM60AQ9NP50 221 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 STEAP1Q9UHE8 339 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 POMT1Q9Y6A1 747 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 V9GY05 133 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 FRYLO94915 3013 aa10.08□□□□□ -0.8
CDH4-201ENST00000543233 A0A0U1RQV5 110 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 SRMP19623 302 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 IGFBP4P22692 258 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 DPP4P27487 766 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 SOX2P48431 317 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 MRPL49Q13405 166 aaKnown RBP10.07□□□□□ -0.8
CDH4-201ENST00000543233 DGAT2L6Q6ZPD8 337 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 CSNK1A1LQ8N752 337 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 OR4N2Q8NGD1 307 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 MRGPRDQ8TDS7 321 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 CORO2AQ92828 525 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 STACQ99469 402 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 SDF2Q99470 211 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 RNF2Q99496 336 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 TRIM2Q9C040 744 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 SLC35B3Q9H1N7 401 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 HEATR5AQ86XA9 2040 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 TRAV27A0A087WT01 109 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 NKX6-3A6NJ46 265 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 C17orf105B2RV13 164 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 PRAMEF26H0Y7S4 382 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 HRKO00198 91 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 SCDO00767 359 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 ZNF749O43361 778 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 SYT7O43581 403 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 VAMP5O95183 116 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 SEMA4FO95754 770 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 PNLIPP16233 465 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 GABRG2P18507 467 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 PPP1R1AQ13522 171 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 AADACL3Q5VUY0 350 aa10.07□□□□□ -0.8
CDH4-201ENST00000543233 TMEM183AQ8IXX5 376 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms