RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TMED1Q13445 227 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 SMN1Q16637 294 aaKnown RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 TMEM155Q4W5P6 130 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 LIPNQ5VXI9 398 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 SFRP4Q6FHJ7 346 aaPredicted RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 LYPD2Q6UXB3 125 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 PEG10Q86TG7 708 aaKnown RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 ELMOD2Q8IZ81 293 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 PRSS35Q8N3Z0 413 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 HPSE2Q8WWQ2 592 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 OR5P3Q8WZ94 311 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 PIGCQ92535 297 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 RFKQ969G6 155 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 TMEM186Q96B77 213 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 LGALS12Q96DT0 336 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 TMEM246Q9BRR3 403 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 ZNF649Q9BS31 505 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 BEX2Q9BXY8 128 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 PATZ1Q9HBE1 687 aaKnown RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 GPR84Q9NQS5 396 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 MMP26Q9NRE1 261 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 C1orf123Q9NWV4 160 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 SMPD3Q9NY59 655 aaPredicted RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 NUFIP1Q9UHK0 495 aaKnown RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 OR52A1Q9UKL2 312 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 KCNS2Q9ULS6 477 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 MYRFQ9Y2G1 1151 aa8.15□□□□□ -1.1
YBX3-212ENST00000542002 SONP18583 2426 aaKnown RBP8.15□□□□□ -1.1
YBX3-212ENST00000542002 FBN1P35555 2871 aaKnown RBP8.15□□□□□ -1.11
YBX3-212ENST00000542002 ABCA2Q9BZC7 2435 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 PPIAL4EA0A075B759 164 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 A6NIN4 97 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 CEACAM18A8MTB9 384 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 PPIAL4DF5H284 164 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 P2RY10O00398 339 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 PHYHO14832 338 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 PHF1O43189 567 aaPredicted RBP8.14□□□□□ -1.11
YBX3-212ENST00000542002 FCN3O75636 299 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 PPIAL4FP0DN26 164 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 EGR1P18146 543 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 CFL1P23528 166 aaKnown RBP8.14□□□□□ -1.11
YBX3-212ENST00000542002 ATP6V1E1P36543 226 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 PSMB10P40306 273 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 MDH2P40926 338 aaKnown RBP8.14□□□□□ -1.11
YBX3-212ENST00000542002 OR12D2P58182 307 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 CSNK2BP67870 215 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 ADARB1P78563 741 aaKnown RBP8.14□□□□□ -1.11
YBX3-212ENST00000542002 LCN2P80188 198 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 ZNF154Q13106 437 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 ODF4Q2M2E3 257 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 CHRFAM7AQ494W8 412 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 ZNF404Q494X3 552 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 TP53I3Q53FA7 332 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 FAM76BQ5HYJ3 339 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 OGFRL1Q5TC84 451 aaPredicted RBP8.14□□□□□ -1.11
YBX3-212ENST00000542002 MEDAGQ5VYS4 303 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 CATSPERDQ86XM0 798 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 KLBQ86Z14 1044 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 RDH10Q8IZV5 341 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 GCSAMQ8N6F7 178 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 YIPF7Q8N8F6 280 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 SPERTQ8NA61 448 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 DEFB108BQ8NET1 73 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 CSNK2A3Q8NEV1 391 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 OR1M1Q8NGA1 313 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 OR14K1Q8NGZ2 314 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 OR51F2Q8NH61 342 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 ERGIC1Q969X5 290 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 SEH1LQ96EE3 360 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 FAM71F1Q96KD3 344 aaPredicted RBP8.14□□□□□ -1.11
YBX3-212ENST00000542002 PAPOLGQ9BWT3 736 aaKnown RBP8.14□□□□□ -1.11
YBX3-212ENST00000542002 FN3KRPQ9HA64 309 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 RNF7Q9UBF6 113 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.14□□□□□ -1.11
YBX3-212ENST00000542002 PPIAL4AQ9Y536 164 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 SNX5Q9Y5X3 404 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 DYSFO75923 2080 aa8.14□□□□□ -1.11
YBX3-212ENST00000542002 C2CD3Q4AC94 2353 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 MALRD1Q5VYJ5 2156 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 ERICH4A6NGS2 130 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 LRRC30A6NM36 301 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 LOC110117498-PIK3R3F6TDL0 507 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 H3BSH0 61 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.13□□□□□ -1.11
YBX3-212ENST00000542002 IFNL4K9M1U5 179 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 CDIPTO14735 213 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 CASQ2O14958 399 aaPredicted RBP8.13□□□□□ -1.11
YBX3-212ENST00000542002 SULT1C4O75897 302 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 FSTL3O95633 263 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 KRT8P05787 483 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 DBTP11182 482 aaKnown RBP8.13□□□□□ -1.11
YBX3-212ENST00000542002 FAHP16930 419 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 CD80P33681 288 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 KIR3DL2P43630 455 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 NANOS3P60323 173 aaKnown RBP8.13□□□□□ -1.11
YBX3-212ENST00000542002 PAX2Q02962 417 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 ZNF91Q05481 1191 aa8.13□□□□□ -1.11
YBX3-212ENST00000542002 ZNF829Q3KNS6 432 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms