RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 LINC00052Q96N35 136 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 OXGR1Q96P68 337 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 CLCC1Q96S66 551 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 SULT4A1Q9BR01 284 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 PIGQQ9BRB3 760 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 DNTTIP1Q9H147 329 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 KCNJ16Q9NPI9 418 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 ABCA1O95477 2261 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 ANKUB1A6NFN9 424 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 TRAPPC2LH3BP13 241 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 KLF4O43474 513 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 EGR4Q05215 589 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 RTN4RQ9BZR6 473 aa14.34□□□□□ -0.11
VARS2-212ENST00000542001 RAB27BO00194 218 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 HSD17B6O14756 317 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 TGM6O95932 706 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 TK1P04183 234 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 OR5H8P0DN80 308 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 PGAP1Q75T13 922 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 RABEPKQ7Z6M1 372 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 MRGPRX4Q96LA9 322 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 DHRS9Q9BPW9 319 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 FAAP24Q9BTP7 215 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 ZNF768Q9H5H4 540 aaKnown RBP14.33□□□□□ -0.11
VARS2-212ENST00000542001 CDH20Q9HBT6 801 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 ZNF286AQ9HBT8 521 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 LRFN1Q9P244 771 aa14.33□□□□□ -0.11
VARS2-212ENST00000542001 APLNRP35414 380 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 CLDN15P56746 228 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 KISS1Q15726 138 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 ZNF774Q6NX45 483 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 NAA40Q86UY6 237 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 FBXL14Q8N1E6 418 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 CLEC1AQ8NC01 280 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 PSMF1Q92530 271 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 SEH1LQ96EE3 360 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 ZNF275Q9NSD4 429 aaPredicted RBP14.33□□□□□ -0.12
VARS2-212ENST00000542001 URGCP-MRPS24S4R325 110 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 ZNF407Q9C0G0 2248 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 A6NCN8 305 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 FCGR2CP31995 323 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 LINC01590Q5TEZ4 76 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 ZNF626Q68DY1 528 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 ACOT7LQ6ZUV0 252 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 MARC2Q969Z3 335 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 SDSLQ96GA7 329 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 ZC3HAV1LQ96H79 300 aaKnown RBP14.33□□□□□ -0.12
VARS2-212ENST00000542001 RASL10BQ96S79 203 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 MTCH2Q9Y6C9 303 aa14.33□□□□□ -0.12
VARS2-212ENST00000542001 C5orf49A4QMS7 147 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 PRR32B1ATL7 298 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 EIF1BO60739 113 aaKnown RBP14.32□□□□□ -0.12
VARS2-212ENST00000542001 UPK3AO75631 287 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 IFNA5P01569 189 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 GRPP07492 148 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 OR13C7P0DN81 318 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 LYG2Q86SG7 212 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 CMTM1Q8IZ96 169 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 TERB2Q8NHR7 220 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 SCPEP1Q9HB40 452 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 FAM96BQ9Y3D0 163 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 FBXO7Q9Y3I1 522 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 TXNL1O43396 289 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 BGLAPP02818 100 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 FAM122CQ6P4D5 195 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.32□□□□□ -0.12
VARS2-212ENST00000542001 SLC25A45Q8N413 288 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 LILRB2Q8N423 598 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 OR8B12Q8NGG6 310 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 DYRK2Q92630 601 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 DUSP15Q9H1R2 295 aaPredicted RBP14.32□□□□□ -0.12
VARS2-212ENST00000542001 UFSP2Q9NUQ7 469 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 LOC101059948A0A1B0GTJ6 334 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 ZNF674Q2M3X9 581 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 AKR1C8PQ5T2L2 129 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 ATPAF1Q5TC12 328 aaPredicted RBP14.32□□□□□ -0.12
VARS2-212ENST00000542001 EXD3Q8N9H8 876 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 TCEAL3Q969E4 200 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 FBXW5Q969U6 566 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 OBP2BQ9NPH6 170 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 OPN4Q9UHM6 478 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 KIAA2026Q5HYC2 2103 aa14.32□□□□□ -0.12
VARS2-212ENST00000542001 CADP27708 2225 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 LOC102725191A0A1B0GVB3 256 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 ANKRD30BLA7E2S9 258 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 ASAH2BP0C7U1 165 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 GALNSP34059 522 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 RBP2P50120 134 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 ARL6IP1Q15041 203 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 NOXO1Q8NFA2 376 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 RGP1Q92546 391 aaPredicted RBP14.31□□□□□ -0.12
VARS2-212ENST00000542001 WNK2Q9Y3S1 2297 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 TIAF1O95411 115 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 FAM157BP0CG42 384 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 GRB2P62993 217 aaKnown RBP14.31□□□□□ -0.12
VARS2-212ENST00000542001 RAB11FIP2Q7L804 512 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 TMEM104Q8NE00 496 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 WNT2BQ93097 391 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 REEP6Q96HR9 211 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 C1orf123Q9NWV4 160 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms