RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SEMG1P04279 462 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 CD200P41217 278 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 CASP6P55212 293 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 HLA-DRB3P79483 266 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 SURF2Q15527 256 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 TOX2Q96NM4 488 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 SIRT7Q9NRC8 400 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 TCRBV16S1A1N1A0A5B0 115 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 IAPPP10997 89 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 IL3RAP26951 378 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 KLF9Q13886 244 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 FZD2Q14332 565 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF77Q15935 545 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 OSR2Q8N2R0 312 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 CISD2Q8N5K1 135 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 PHOSPHO2Q8TCD6 241 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 MS4A10Q96PG2 267 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 MBNL1Q9NR56 388 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 NTMQ9P121 344 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 A0A1W2PPH5 198 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 ANKUB1A6NFN9 424 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 HSBP1O75506 76 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 GUSBP08236 651 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 TBXA2RP21731 343 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 TBC1D28Q2M2D7 210 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 CHAC2Q8WUX2 184 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 TAAR6Q96RI8 345 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 TAAR9Q96RI9 348 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 RAB40CQ96S21 281 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 PRO1933Q9H354 126 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 FGF21Q9NSA1 209 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 DHCR7Q9UBM7 475 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 GABRA4P48169 554 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 ARG2P78540 354 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF573Q86YE8 665 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF775Q96BV0 537 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 MRGPRX4Q96LA9 322 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 FBXL17Q9UF56 701 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 CLEC18AA5D8T8 446 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 NPIPB8E9PQR5 432 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 SLC25A4P12235 298 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 GSK3AP49840 483 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 EXT1Q16394 746 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 CBLN2Q8IUK8 224 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 CLEC18CQ8NCF0 446 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 C17orf47Q8NEP4 570 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 SPSB1Q96BD6 273 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 SHARPINQ9H0F6 387 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 TBC1D29Q9UFV1 150 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 MFNGO00587 321 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 SH2D1BO14796 132 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 OR2J2O76002 312 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 SLC25A6P12236 298 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 RAC1P63000 192 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 SHHQ15465 462 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 Q6ZNB5 142 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 CDC20BQ86Y33 519 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 NRSN2Q9GZP1 204 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 PPP1R14DQ9NXH3 145 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 ICOSLGO75144 302 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 PKIAP61925 76 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 PWWP2BQ6NUJ5 590 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 FBXO34Q9NWN3 711 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 CLCF1Q9UBD9 225 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 PISDQ9UG56 409 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 KIAA1551Q9HCM1 1747 aa13.47□□□□□ -0.25
SMARCA4-207ENST00000541122 TCAPO15273 167 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 CRHP06850 196 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 RUNX2Q13950 521 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 TMEM37Q8WXS4 190 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 PPP1R3CQ9UQK1 317 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 KCNE3Q9Y6H6 103 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 NRAPQ86VF7 1730 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 PHIPQ8WWQ0 1821 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 DOCK2Q92608 1830 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 H3BNC9 293 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 HS3ST1O14792 307 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 WDR1O75083 606 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 CT45A10P0DMU9 189 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF121P58317 390 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 SEZ6L2Q6UXD5 910 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 MVB12AQ96EY5 273 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 Q9N2K0 584 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 PPIL1Q9Y3C6 166 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 NKX2-2O95096 273 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 CRYBA1P05813 215 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 CD46P15529 392 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 CLDN15P56746 228 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 SLC37A2Q8TED4 501 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF296Q8WUU4 475 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 MYEOVQ96EZ4 313 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 MRPS18AQ9NVS2 196 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 ST3GAL6Q9Y274 331 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 HCFC2Q9Y5Z7 792 aa13.46□□□□□ -0.25
SMARCA4-207ENST00000541122 TNRC6CQ9HCJ0 1690 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-207ENST00000541122 FUT6P51993 359 aa13.46□□□□□ -0.26
SMARCA4-207ENST00000541122 ZNF273Q14593 569 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms