RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 OR52N4Q8NGI2 321 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 SSC4DQ8WTU2 575 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 SPSB1Q96BD6 273 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 DIRAS2Q96HU8 199 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 BCL2L14Q9BZR8 327 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 PTTG3PQ9NZH4 202 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 ETV7Q9Y603 341 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 GMDSO60547 372 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 HPGDSO60760 199 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 APOA1P02647 267 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 OCMP0CE72 109 aaPredicted RBP15.28■□□□□ 0.04
CLIP1-215ENST00000541108 SNRPBP14678 240 aaKnown RBP15.28■□□□□ 0.04
CLIP1-215ENST00000541108 CD40LGP29965 261 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 ZNF93P35789 620 aaPredicted RBP15.28■□□□□ 0.04
CLIP1-215ENST00000541108 EVX1P49640 407 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 ADORA2A-AS1P86434 159 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 NAAAQ02083 359 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 METAP1DQ6UB28 335 aaPredicted RBP15.28■□□□□ 0.04
CLIP1-215ENST00000541108 JAGN1Q8N5M9 183 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 SAMD12Q8N8I0 201 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 PIGTQ969N2 578 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 KCNN3Q9UGI6 736 aa15.28■□□□□ 0.04
CLIP1-215ENST00000541108 ERRFI1Q9UJM3 462 aaPredicted RBP15.28■□□□□ 0.04
CLIP1-215ENST00000541108 IGHV2OR16-5A0A0B4J2B6 119 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 GGT3PA6NGU5 568 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 CST4P01036 141 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 NRASP01111 189 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 PPP5CP53041 499 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 HLXQ14774 488 aaPredicted RBP15.27■□□□□ 0.03
CLIP1-215ENST00000541108 CNN3Q15417 329 aaKnown RBP15.27■□□□□ 0.03
CLIP1-215ENST00000541108 RAB11BQ15907 218 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 SLC25A28Q96A46 364 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 LRRC46Q96FV0 321 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 CCDC120Q96HB5 630 aa15.27■□□□□ 0.03
CLIP1-215ENST00000541108 ESPL1Q14674 2120 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 CD300LBA8K4G0 201 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 CRYAAP02489 173 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 HCKP08631 526 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 FAM157BP0CG42 384 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 RAC2P15153 192 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 PRKACBP22694 351 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 AZGP1P25311 298 aaKnown RBP15.26■□□□□ 0.03
CLIP1-215ENST00000541108 PTBP1P26599 531 aaKnown RBP eCLIP15.26■□□□□ 0.03
CLIP1-215ENST00000541108 ZNF83P51522 516 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 CLDN12P56749 244 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 SEZ6L2Q6UXD5 910 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 C22orf34Q6ZV56 151 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 OR56B2PQ8NGI1 322 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 OR1J1Q8NGS3 322 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 OR5H6Q8NGV6 325 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 LGALS14Q8TCE9 139 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 BORCS5Q969J3 196 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 FAM3DQ96BQ1 224 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 CPNE2Q96FN4 548 aaPredicted RBP15.26■□□□□ 0.03
CLIP1-215ENST00000541108 CNTD2Q9H8S5 307 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 CYSLTR2Q9NS75 346 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 NPAP1Q9NZP6 1156 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 CGGBP1Q9UFW8 167 aaPredicted RBP15.26■□□□□ 0.03
CLIP1-215ENST00000541108 OR5V1Q9UGF6 321 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 RHBDD3Q9Y3P4 386 aa15.26■□□□□ 0.03
CLIP1-215ENST00000541108 A0A0B4J203 849 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 FABP12A6NFH5 140 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 M0R1B8 84 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 ARSBP15848 533 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 ELK1P19419 428 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 TLE1Q04724 770 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 DCTN2Q13561 401 aaKnown RBP15.25■□□□□ 0.03
CLIP1-215ENST00000541108 KISS1Q15726 138 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 UBE2NLQ5JXB2 153 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 UBASH3BQ8TF42 649 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 OR2J1Q9GZK6 312 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 OR51B6Q9H340 312 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 POFUT1Q9H488 388 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 SPEF1Q9Y4P9 236 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 PRR14LQ5THK1 2151 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 LOC100289279A0A1B0GTE1 492 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 SELEP16581 610 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 TALDO1P37837 337 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 PRSS12P56730 875 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 C2orf76Q3KRA6 126 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 C4orf17Q53FE4 359 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 CNIH2Q6PI25 160 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 OR51D1Q8NGF3 324 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 PRR7Q8TB68 274 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 SLC25A40Q8TBP6 338 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 CA5BP1Q8WTZ4 195 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 RAB40AQ8WXH6 277 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 PIGCQ92535 297 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 RNASE6Q93091 150 aaKnown RBP15.25■□□□□ 0.03
CLIP1-215ENST00000541108 HAVCR1Q96D42 359 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 CMBLQ96DG6 245 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 MARS2Q96GW9 593 aaKnown RBP15.25■□□□□ 0.03
CLIP1-215ENST00000541108 SOSTQ9BQB4 213 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 ABCG5Q9H222 651 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 PALMDQ9NP74 551 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 SLC7A11Q9UPY5 501 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 V9GYH0 126 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 NBASA2RRP1 2371 aa15.25■□□□□ 0.03
CLIP1-215ENST00000541108 KALRNO60229 2985 aa15.24■□□□□ 0.03
CLIP1-215ENST00000541108 HEATR1Q9H583 2144 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms