RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 AMBNQ9NP70 447 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 GPR84Q9NQS5 396 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 C8orf4Q9NR00 106 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 C14orf119Q9NWQ9 140 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 HIF1ANQ9NWT6 349 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 NUFIP1Q9UHK0 495 aaKnown RBP7.76□□□□□ -1.17
SNHG1-215ENST00000540904 GNG8Q9UK08 70 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 CDC42EP3Q9UKI2 254 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 SLC22A13Q9Y226 551 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 FN1P02751 2386 aaKnown RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 TLN2Q9Y4G6 2542 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 CHD3Q12873 2000 aaKnown RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 hCG_1807616A0A1W2PRN6 198 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF850A8MQ14 1090 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 PLPP2O43688 288 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 MTRF1O75570 445 aaKnown RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 SULT1C4O75897 302 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 PTBP3O95758 552 aaKnown RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 CLIC3O95833 236 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 CST4P01036 141 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 DBTP11182 482 aaKnown RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 MAP2K3P46734 347 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 DVL1P1P54792 670 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ACTC1P68032 377 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ACTA1P68133 377 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ELF3P78545 371 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 LCN2P80188 198 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 HOXA4Q00056 320 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 IL5RAQ01344 420 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF85Q03923 595 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ODF4Q2M2E3 257 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 CR1LQ2VPA4 569 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 TMEM155Q4W5P6 130 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 TP53I3Q53FA7 332 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 FAM120AOSQ5T036 256 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF684Q5T5D7 378 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 LIPNQ5VXI9 398 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF826PQ6ZT77 177 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 KCTD8Q6ZWB6 473 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 FAM220AQ7Z4H9 259 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 WDR86Q86TI4 376 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ELMOD2Q8IZ81 293 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 MUC20Q8N307 709 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 SPICQ8N5J4 248 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ACBD7Q8N6N7 88 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 PACRGLQ8N7B6 248 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 BOLLQ8N9W6 283 aaKnown RBP7.75□□□□□ -1.17
SNHG1-215ENST00000540904 PLPP7Q8NBV4 271 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 C19orf18Q8NEA5 215 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 SEMA6DQ8NFY4 1073 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 Q8TCH9 128 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 RORBQ92753 470 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 TMEM186Q96B77 213 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 LGALS12Q96DT0 336 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 MICU1Q9BPX6 476 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 SHARPINQ9H0F6 387 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 DCLRE1BQ9H816 532 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 G6PC2Q9NQR9 355 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 ACOXLQ9NUZ1 547 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 C1orf123Q9NWV4 160 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 TMEM160Q9NX00 188 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 RNF7Q9UBF6 113 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 MPC1Q9Y5U8 109 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 SNX5Q9Y5X3 404 aa7.75□□□□□ -1.17
SNHG1-215ENST00000540904 PPIAL4EA0A075B759 164 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 TRAV20A0A0B4J274 112 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF816-ZNF321PA0A0X1KG74 233 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 CEACAM18A8MTB9 384 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 PPIAL4DF5H284 164 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 J3QRE1 110 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 P2RY10O00398 339 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 CASQ2O14958 399 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 DHRS3O75911 302 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 IGLV3-1P01715 115 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 PPIAL4FP0DN26 164 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 ATP6V1B1P15313 513 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 FAHP16930 419 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 HNF1AP20823 631 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 THBS2P35442 1172 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 PSMB10P40306 273 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 CSNK2BP67870 215 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 RIPPLY1Q0D2K3 151 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF154Q13106 437 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 SMN1Q16637 294 aaKnown RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 DMRTC1Q5HYR2 192 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 CEP78Q5JTW2 689 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 OGFRL1Q5TC84 451 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF691Q5VV52 312 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 TTC23Q5W5X9 447 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 SFRP4Q6FHJ7 346 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 FAHD2BQ6P2I3 314 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-215ENST00000540904 THAP5Q7Z6K1 395 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 CATSPERDQ86XM0 798 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 ZDHHC23Q8IYP9 409 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 DHRSXQ8N5I4 330 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 DEFB108BQ8NET1 73 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 OR1M1Q8NGA1 313 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 APH1BQ8WW43 257 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 OR5P3Q8WZ94 311 aa7.74□□□□□ -1.17
SNHG1-215ENST00000540904 ITPKCQ96DU7 683 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms