RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 DRAM2Q6UX65 266 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 MISPQ8IVT2 679 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 NAXDQ8IW45 347 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 OR2M3Q8NG83 312 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 MITD1Q8WV92 249 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 MR1Q95460 341 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 SPACA9Q96E40 222 aaPredicted RBP12.03□□□□□ -0.48
BNIP3-202ENST00000540159 EDEM2Q9BV94 578 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 SMIM3Q9BZL3 60 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 SLCO5A1Q9H2Y9 848 aa12.03□□□□□ -0.48
BNIP3-202ENST00000540159 PTRH2Q9Y3E5 179 aaKnown RBP12.03□□□□□ -0.48
BNIP3-202ENST00000540159 H0YIZ8 118 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 BPNT1O95861 308 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 AGTR1P30556 359 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 RPS18P62269 152 aaKnown RBP12.02□□□□□ -0.48
BNIP3-202ENST00000540159 ZP4Q12836 540 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 KISS1Q15726 138 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 KCNRGQ8N5I3 272 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 MRGPRX4Q96LA9 322 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 CHRNA10Q9GZZ6 450 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 SMOC1Q9H4F8 434 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 GAREM1Q9H706 876 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 GPR173Q9NS66 373 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 SLC39A1Q9NY26 324 aa12.02□□□□□ -0.48
BNIP3-202ENST00000540159 DIDO1Q9BTC0 2240 aaKnown RBP12.02□□□□□ -0.48
BNIP3-202ENST00000540159 FAM230AA0A1W2PPH8 454 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 TMEM14DPA8MWL7 114 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 TNFSF11O14788 317 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 BCL2L11O43521 198 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 HIST1H1DP16402 221 aaKnown RBP12.02□□□□□ -0.49
BNIP3-202ENST00000540159 CXCL12P48061 93 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 P2RY4P51582 365 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 SNU13P55769 128 aaKnown RBP12.02□□□□□ -0.49
BNIP3-202ENST00000540159 ACY1Q03154 408 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 UBE2V2Q15819 145 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 ZNF468Q5VIY5 522 aaPredicted RBP12.02□□□□□ -0.49
BNIP3-202ENST00000540159 CLEC18BQ6UXF7 455 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 ACOT7LQ6ZUV0 252 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 OR5L2Q8NGL0 311 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 OR5H2Q8NGV7 314 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 OR10C1Q96KK4 312 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 LYZL4Q96KX0 146 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 RASL12Q9NYN1 266 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 EXPH5Q8NEV8 1989 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 KRBOX1C9JBD0 128 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 SCGB1D2O95969 90 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 UBBP0CG47 229 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 RPS27AP62979 156 aaKnown RBP12.02□□□□□ -0.49
BNIP3-202ENST00000540159 UBA52P62987 128 aaKnown RBP12.02□□□□□ -0.49
BNIP3-202ENST00000540159 IKZF1Q13422 519 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 ZNF169Q14929 603 aaPredicted RBP12.02□□□□□ -0.49
BNIP3-202ENST00000540159 ZSCAN4Q8NAM6 433 aaPredicted RBP12.02□□□□□ -0.49
BNIP3-202ENST00000540159 TERB2Q8NHR7 220 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 NUBPLQ8TB37 319 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 TMEM230Q96A57 120 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 C1orf147Q96MC9 270 aaPredicted RBP12.02□□□□□ -0.49
BNIP3-202ENST00000540159 PIGLQ9Y2B2 252 aa12.02□□□□□ -0.49
BNIP3-202ENST00000540159 A0A0D9SG52 128 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 CNR1P21554 472 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 PPIAP62937 165 aaKnown RBP12.01□□□□□ -0.49
BNIP3-202ENST00000540159 FGL1Q08830 312 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 C9orf135Q5VTT2 229 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 DEGS2Q6QHC5 323 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 YRDCQ86U90 279 aaKnown RBP12.01□□□□□ -0.49
BNIP3-202ENST00000540159 TMEM156Q8N614 296 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 TOMM40LQ969M1 308 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 ALKBH3Q96Q83 286 aaPredicted RBP12.01□□□□□ -0.49
BNIP3-202ENST00000540159 S100A13Q99584 98 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 PNRC2Q9NPJ4 139 aaKnown RBP12.01□□□□□ -0.49
BNIP3-202ENST00000540159 MRPS17Q9Y2R5 130 aaKnown RBP12.01□□□□□ -0.49
BNIP3-202ENST00000540159 FAM96BQ9Y3D0 163 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 RP1L1Q8IWN7 2480 aaPredicted RBP12.01□□□□□ -0.49
BNIP3-202ENST00000540159 MED19A0JLT2 244 aaPredicted RBP12.01□□□□□ -0.49
BNIP3-202ENST00000540159 TRIM77I1YAP6 450 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 FBXO24O75426 580 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 CD8AP01732 235 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 CFPP27918 469 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 PSMB6P28072 239 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 RFC3P40938 356 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 ID4P47928 161 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 CSNK1A1P48729 337 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 SSBP1Q04837 148 aaKnown RBP12.01□□□□□ -0.49
BNIP3-202ENST00000540159 ZNF273Q14593 569 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 SP6Q3SY56 376 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 C5orf46Q6UWT4 87 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 TMEM17Q86X19 198 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 HRH4Q9H3N8 390 aa12.01□□□□□ -0.49
BNIP3-202ENST00000540159 TSPAN9O75954 239 aa12□□□□□ -0.49
BNIP3-202ENST00000540159 CRHP06850 196 aa12□□□□□ -0.49
BNIP3-202ENST00000540159 RCC1P18754 421 aaPredicted RBP12□□□□□ -0.49
BNIP3-202ENST00000540159 RAB6AP20340 208 aa12□□□□□ -0.49
BNIP3-202ENST00000540159 RAB32Q13637 225 aa12□□□□□ -0.49
BNIP3-202ENST00000540159 TAF9Q16594 264 aa12□□□□□ -0.49
BNIP3-202ENST00000540159 GUCA2BQ16661 112 aa12□□□□□ -0.49
BNIP3-202ENST00000540159 PLEKHN1Q494U1 663 aaPredicted RBP12□□□□□ -0.49
BNIP3-202ENST00000540159 TSPO2Q5TGU0 170 aa12□□□□□ -0.49
BNIP3-202ENST00000540159 PGAP1Q75T13 922 aa12□□□□□ -0.49
BNIP3-202ENST00000540159 C5orf24Q7Z6I8 188 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms