RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PET100P0DJ07 73 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 OR8G3PP0DMU2 310 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 HKR1P10072 659 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 PTHLHP12272 177 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 TCN2P20062 427 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 S1PR1P21453 382 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 GALNSP34059 522 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 KCNJ3P48549 501 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 SULT1A2P50226 295 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 EFNB2P52799 333 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 ATP1B3P54709 279 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 DVL1P1P54792 670 aaPredicted RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 RAB1AP62820 205 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 BTG2P78543 158 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 IL13RA1P78552 427 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 HABP2Q14520 560 aaPredicted RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 IGFBP7Q16270 282 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF74Q16587 644 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 EIF2S3LQ2VIR3 472 aaKnown RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 RNASE10Q5GAN6 216 aaKnown RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 FAM76BQ5HYJ3 339 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 FAM74A1Q5RGS3 127 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 PRAMEF17Q5VTA0 474 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 WBP2NLQ6ICG8 309 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 PRSS54Q6PEW0 395 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 KCTD18Q6PI47 426 aaPredicted RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 DEGS2Q6QHC5 323 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 KIRREL2Q6UWL6 708 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 C5orf46Q6UWT4 87 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 BTNL8Q6UX41 500 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF600Q6ZNG1 722 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 ADGRE4PQ86SQ3 457 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF584Q8IVC4 421 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF679Q8IYX0 411 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 PRSS35Q8N3Z0 413 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 ZBTB34Q8NCN2 500 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 C7orf57Q8NEG2 295 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 OR4A4PQ8NGN8 299 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 OTOSQ8NHW6 89 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 ADAMTS17Q8TE56 1095 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 GRHL3Q8TE85 626 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 NUDCD2Q8WVJ2 157 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 INTS12Q96CB8 462 aaKnown RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 TMEM41AQ96HV5 264 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 OR2M4Q96R27 311 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 INTS14Q96SY0 518 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 SLC6A7Q99884 636 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 SSBP4Q9BWG4 385 aaPredicted RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 TINAGL1Q9GZM7 467 aaPredicted RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 TMPRSS5Q9H3S3 457 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 XKR8Q9H6D3 395 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 UCK1Q9HA47 277 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 RHOFQ9HBH0 211 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 CHMP1AQ9HD42 196 aaPredicted RBP6.79□□□□□ -1.32
CCDC60-204ENST00000539847 TREM1Q9NP99 234 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 CUTCQ9NTM9 273 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 FBXO34Q9NWN3 711 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 FBXL7Q9UJT9 491 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 TINAGQ9UJW2 476 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 EDARQ9UNE0 448 aa6.79□□□□□ -1.32
CCDC60-204ENST00000539847 HIVEP3Q5T1R4 2406 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 A0A1B0GW64 132 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 LINC00587B1AMM8 73 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 SGCEO43556 437 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 FADS1O60427 444 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 STK17BO94768 372 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 DDAH2O95865 285 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 IGHV2-5P01817 119 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 HLA-AP01891 365 aaKnown RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ITGA5P08648 1049 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 SLC2A1P11166 492 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 AMY2BP19961 511 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ABCD3P28288 659 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 PTGER1P34995 402 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ACTR1BP42025 376 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 KIR3DL2P43630 455 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 NPBWR1P48145 328 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 SOX2P48431 317 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 PPM1FP49593 454 aaPredicted RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 CTXN1P60606 82 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ACTR1AP61163 376 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 RPL11P62913 178 aaKnown RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ADAM8P78325 824 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 PMPCAQ10713 525 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 IL15RAQ13261 267 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 IL11RAQ14626 422 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ESPL1Q14674 2120 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ZNF260Q3ZCT1 412 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 KLHL26Q53HC5 615 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 TMEM128Q5BJH2 165 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ALG10Q5BKT4 473 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 VAX1Q5SQQ9 334 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 TMEM225Q6GV28 225 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 SLC18B1Q6NT16 456 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 TMEM88Q6PEY1 159 aa6.78□□□□□ -1.32
CCDC60-204ENST00000539847 PAPD4Q6PIY7 484 aaKnown RBP6.78□□□□□ -1.32
CCDC60-204ENST00000539847 ATG4DQ86TL0 474 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms