RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SELLP14151 372 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 AMY2BP19961 511 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 RPS10P46783 165 aaKnown RBP16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 CAMLGP49069 296 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 C1orf140Q5VVS0 124 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 OR13C9Q8NGT0 318 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 EMG1Q92979 244 aaKnown RBP16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 B3GALT5Q9Y2C3 310 aa16.48■□□□□ 0.23
SFSWAP-207ENST00000538548 ARHGEF17Q96PE2 2063 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 SOCS1O15524 211 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 SYT7O43581 403 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 IGHMP01871 453 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 SUCLG1P53597 346 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 FAM78AQ5JUQ0 283 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 RPUSD3Q6P087 351 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF529Q6P280 563 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF574Q6ZN55 896 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 SLC26A10Q8NG04 563 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 OR10H5Q8NGA6 315 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 PRDM13Q9H4Q3 707 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 PLEKHA2Q9HB19 425 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 TUBD1Q9UJT1 453 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 SRPK3Q9UPE1 567 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 SPEGQ15772 3267 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 CLDN4O14493 209 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 DXOO77932 396 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 CLPSP04118 112 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 HIST1H1BP16401 226 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 OR3A2P47893 321 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 CLINT1Q14677 625 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 PCK2Q16822 640 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 LINC00346Q8IVM7 164 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 ARHGEF39Q8N4T4 335 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 TMEM104Q8NE00 496 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 TSACCQ96A04 125 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 C19orf12Q9NSK7 152 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 HRASLS2Q9NWW9 162 aa16.47■□□□□ 0.23
SFSWAP-207ENST00000538548 ATG2BQ96BY7 2078 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 GMFGO60234 142 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 MPIG6BO95866 241 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 TTRP02766 147 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 CTSBP07858 339 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 H2BFMP0C1H6 154 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 RBMXP38159 391 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 SLC35A1P78382 337 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 ZNF117Q03924 483 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 ERV3-1Q14264 604 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 SURF2Q15527 256 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 CDPF1Q6NVV7 123 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 GLIPR1L1Q6UWM5 242 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 SSX9Q7RTT3 188 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 FNDC9Q8TBE3 224 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 MARS2Q96GW9 593 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 DOK5Q9P104 306 aa16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 TMEM184BQ9Y519 407 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-207ENST00000538548 BLACEA4D250 179 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 RAD51DO75771 328 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 LMO1P25800 156 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 TMEM50BP56557 158 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 SHHQ15465 462 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 DEFB110Q30KQ9 67 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 ZNF776Q68DI1 518 aaPredicted RBP16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 KCNG3Q8TAE7 436 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 SLC25A43Q8WUT9 341 aaPredicted RBP16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 MAFIPQ8WZ33 124 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 IGFLR1Q9H665 355 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 FAM206AQ9NX38 181 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 SUSD2Q9UGT4 822 aa16.46■□□□□ 0.22
SFSWAP-207ENST00000538548 TNRC18O15417 2968 aaPredicted RBP16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 CPAMD8Q8IZJ3 1885 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 A8MVM7 634 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 HCRTR2O43614 444 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 CHATP28329 748 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 RBP2P50120 134 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 SEC13P55735 322 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 NDUFA6P56556 154 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 TAS2R46P59540 309 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 MR1Q95460 341 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 ERGIC1Q969X5 290 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 CENPMQ9NSP4 180 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 MRPS28Q9Y2Q9 187 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 STRAPQ9Y3F4 350 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 FBXO7Q9Y3I1 522 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 BORCS7-ASMTA0A0B4J1R7 106 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 CDC14BO60729 498 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 RNF224P0DH78 156 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 SLC2A1P11166 492 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 FHITP49789 147 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 RNF133Q8WVZ7 376 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 MUCL1Q96DR8 90 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 GINS3Q9BRX5 216 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 TMEM59Q9BXS4 323 aa16.45■□□□□ 0.22
SFSWAP-207ENST00000538548 COL6A3P12111 3177 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 A0A1B0GV90 55 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 A0A1B0GW64 132 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 SDCBPO00560 298 aaPredicted RBP16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 KNG1P01042 644 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 OR13C7P0DN81 318 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 FCARP24071 287 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms