RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 PRSS41Q7RTY9 318 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 C6orf223Q8N319 242 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 CCDC71LQ8N9Z2 235 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 HSD17B11Q8NBQ5 300 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 OR5B12Q96R08 314 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 RANBP9Q96S59 729 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 C20orf85Q9H1P6 137 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 ISG20L2Q9H9L3 353 aaKnown RBP6.78□□□□□ -1.32
CD9-207ENST00000538418 SIAEQ9HAT2 523 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 CD300AQ9UGN4 299 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 DCDC2Q9UHG0 476 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 GNPTGQ9UJJ9 305 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 TMEM131Q92545 1883 aa6.78□□□□□ -1.32
CD9-207ENST00000538418 FLNCQ14315 2725 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 H7C0C1 242 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 TNFP01375 233 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 UCHL3P15374 230 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 ZNF250P15622 560 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 DEFB133Q30KQ1 61 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 C18orf21Q32NC0 220 aaPredicted RBP6.77□□□□□ -1.33
CD9-207ENST00000538418 RWDD4Q6NW29 188 aaKnown RBP6.77□□□□□ -1.33
CD9-207ENST00000538418 UNQ9370/PRO34162Q6UXP9 181 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 TFAP2EQ6VUC0 442 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 PID1Q7Z2X4 250 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 TMEM135Q86UB9 458 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 UMODL1-AS1Q8N2C9 162 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 CLHC1Q8NHS4 586 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 SPATA3Q8NHX4 192 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 NUBPLQ8TB37 319 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 NAF1Q96HR8 494 aaKnown RBP6.77□□□□□ -1.33
CD9-207ENST00000538418 SCRT2Q9NQ03 307 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 EXD2Q9NVH0 621 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 KIF25Q9UIL4 384 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 KLHL21Q9UJP4 597 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 ZNF229Q9UJW7 825 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 UBR5O95071 2799 aaPredicted RBP6.77□□□□□ -1.33
CD9-207ENST00000538418 PLXNA2O75051 1894 aa6.77□□□□□ -1.33
CD9-207ENST00000538418 PTPN13Q12923 2485 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 BOD1L1Q8NFC6 3051 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 IGHV3OR16-13A0A075B7E8 117 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 A0A1W2PNU3 283 aaPredicted RBP6.76□□□□□ -1.33
CD9-207ENST00000538418 TSPAN11A1L157 253 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 RBMY1BA6NDE4 496 aaKnown RBP6.76□□□□□ -1.33
CD9-207ENST00000538418 RBMY1EA6NEQ0 496 aaKnown RBP6.76□□□□□ -1.33
CD9-207ENST00000538418 SIGLEC16A6NMB1 481 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 IFITM10A6NMD0 228 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 XRCC2O43543 280 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 CALB1P05937 261 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 RBMY1DP0C7P1 496 aaKnown RBP6.76□□□□□ -1.33
CD9-207ENST00000538418 RBMY1A1P0DJD3 496 aaKnown RBP6.76□□□□□ -1.33
CD9-207ENST00000538418 LIPCP11150 499 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 SLC26A3P40879 764 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 ATP6V0D1P61421 351 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 PRR4Q16378 134 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 CCDC14Q49A88 953 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 C18orf65Q6ZTR6 163 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 Q8N377 158 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 OR10G3Q8NGC4 313 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 RXFP2Q8WXD0 754 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 C18orf12Q96KH6 178 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 NAA50Q9GZZ1 169 aaKnown RBP6.76□□□□□ -1.33
CD9-207ENST00000538418 KIR3DX1Q9H7L2 352 aa6.76□□□□□ -1.33
CD9-207ENST00000538418 RP1L1Q8IWN7 2480 aaPredicted RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 IGHV7-81A0A0B4J1V7 117 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 A0A1B0GW55 424 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 SLC22A20A6NK97 555 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 D6RAR5 112 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 GALR3O60755 368 aaPredicted RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 E2F6O75461 281 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 HBE1P02100 147 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 DUX4L2P0CJ85 424 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 DUX4L3P0CJ86 424 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 DUX4L4P0CJ87 422 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 DUX4L5P0CJ88 424 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 DUX4L6P0CJ89 424 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 DUX4L7P0CJ90 424 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 GLP1RP43220 463 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 GPR6P46095 362 aaPredicted RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 RHOAP61586 193 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 PAN3Q58A45 887 aaKnown RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 TPRG1LQ5T0D9 272 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 DUX4L9Q6RFH8 374 aaPredicted RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 PHF13Q86YI8 300 aaPredicted RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 ZNF547Q8IVP9 402 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 PDCD6IPQ8WUM4 868 aaKnown RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 ACOT11Q8WXI4 607 aaPredicted RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 LINC00479Q96M42 142 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 TRNT1Q96Q11 434 aaKnown RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 HES7Q9BYE0 225 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 OR52A5Q9H2C5 316 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 CALYQ9NYX4 217 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 DUX4Q9UBX2 424 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 ZNF256Q9Y2P7 627 aaPredicted RBP6.75□□□□□ -1.33
CD9-207ENST00000538418 C15orf41Q9Y2V0 281 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 MYLKQ15746 1914 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 NOTCH2Q04721 2471 aa6.75□□□□□ -1.33
CD9-207ENST00000538418 KIR2DL5BA0A0G2JN68 375 aa6.74□□□□□ -1.33
CD9-207ENST00000538418 KIR2DL5BA0A0G2JPC4 375 aa6.74□□□□□ -1.33
CD9-207ENST00000538418 GOLGA8QA0A0J9YX86 632 aa6.74□□□□□ -1.33
CD9-207ENST00000538418 LYRM9A8MSI8 78 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms