RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 C12orf45Q8N5I9 185 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-208ENST00000538333 ASB13Q8WXK3 278 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 PP6455Q8WZ26 134 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 LOXL4Q96JB6 756 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 GPER1Q99527 375 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 CRLF2Q9HC73 371 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 TMEM38BQ9NVV0 291 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 PCDHGA1Q9Y5H4 931 aa12.28□□□□□ -0.44
LIMK1-208ENST00000538333 OR6C65A6NJZ3 312 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 MFNGO00587 321 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 CDX4O14627 284 aaPredicted RBP12.27□□□□□ -0.45
LIMK1-208ENST00000538333 TERTO14746 1132 aaKnown RBP12.27□□□□□ -0.45
LIMK1-208ENST00000538333 NOS1APO75052 506 aaPredicted RBP12.27□□□□□ -0.45
LIMK1-208ENST00000538333 TRAPPC6AO75865 159 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 SNAPC5O75971 98 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 F10P00742 488 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 IFNA7P01567 189 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 CST2P09228 141 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 FAHP16930 419 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 NAT1P18440 290 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 TBPP20226 339 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 CNR1P21554 472 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 GDF1P27539 372 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 SEC61A1P61619 476 aaKnown RBP12.27□□□□□ -0.45
LIMK1-208ENST00000538333 RAB35Q15286 201 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 NAXDQ8IW45 347 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 CPT1CQ8TCG5 803 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 SPTSSAQ969W0 71 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 C10orf35Q96D05 121 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 RAB3CQ96E17 227 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 THOC3Q96J01 351 aaKnown RBP12.27□□□□□ -0.45
LIMK1-208ENST00000538333 CYYR1Q96J86 154 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 IFT46Q9NQC8 304 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 AUP1Q9Y679 476 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 AHCTF1Q8WYP5 2266 aa12.27□□□□□ -0.45
LIMK1-208ENST00000538333 LEUTXA8MZ59 168 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 L7N2F9 121 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 PTGFRP43088 359 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 HGFACQ04756 655 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 RSPO4Q2I0M5 234 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-208ENST00000538333 SPINK14Q6IE38 97 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 SLC25A42Q86VD7 318 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 ZDHHC22Q8N966 263 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 CCDC54Q8NEL0 328 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 ALKBH3Q96Q83 286 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-208ENST00000538333 CITED4Q96RK1 184 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 LRFN1Q9P244 771 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 GHRLQ9UBU3 117 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 PLEKHA6Q9Y2H5 1048 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 OR2AT4A6NND4 320 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 FOXI3A8MTJ6 420 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-208ENST00000538333 SGCEO43556 437 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 CRTAPO75718 401 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-208ENST00000538333 RAD51DO75771 328 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 NEURL1O76050 574 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 POU3F2P20265 443 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-208ENST00000538333 OR3A3P47888 321 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 RPS27AP62979 156 aaKnown RBP12.26□□□□□ -0.45
LIMK1-208ENST00000538333 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 DRAM2Q6UX65 266 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 AAED1Q7RTV5 226 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 PNLDC1Q8NA58 520 aaKnown RBP12.26□□□□□ -0.45
LIMK1-208ENST00000538333 OR56B1Q8NGI3 324 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 OR52H1Q8NGJ2 320 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 SGK3Q96BR1 496 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 UBQLN2Q9UHD9 624 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 PIGLQ9Y2B2 252 aa12.26□□□□□ -0.45
LIMK1-208ENST00000538333 STMND1H3BQB6 276 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 CYTIPO60759 359 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 C4BPBP20851 252 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 ZBTB25P24278 435 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 DLSTP36957 453 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 FAM189A2Q15884 450 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 PNLIPRP3Q17RR3 467 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 CLLU1Q5K131 121 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 SFRP5Q5T4F7 317 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 RIPPLY2Q5TAB7 128 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 C11orf88Q6PI97 169 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 SLC16A14Q7RTX9 510 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 OR5D18Q8NGL1 313 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 NPRL2Q8WTW4 380 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 ZNF845Q96IR2 970 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-208ENST00000538333 ARHGAP5-AS1Q96IT6 56 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 URM1Q9BTM9 101 aaKnown RBP12.25□□□□□ -0.45
LIMK1-208ENST00000538333 GPR87Q9BY21 358 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 CST11Q9H112 138 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 OR10A2Q9H208 303 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 FN3KRPQ9HA64 309 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 OR6C6A6NF89 314 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 DHRS7CA6NNS2 312 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 C21orf140B9A014 251 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 MTRF1O75570 445 aaKnown RBP12.25□□□□□ -0.45
LIMK1-208ENST00000538333 IL2RAP01589 272 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 B4GALT1P15291 398 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 ACKR3P25106 362 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 SRSF4Q08170 494 aaKnown RBP12.25□□□□□ -0.45
LIMK1-208ENST00000538333 CLVS2Q5SYC1 327 aa12.25□□□□□ -0.45
LIMK1-208ENST00000538333 ZNF774Q6NX45 483 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms