RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 HOXC5Q00444 222 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 TNFRSF9Q07011 255 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ARL6IP1Q15041 203 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 HIST3H3Q16695 136 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NKPD1Q17RQ9 610 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ELP2Q6IA86 826 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NOXA1Q86UR1 476 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ENTHD1Q8IYW4 607 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 SYS1Q8N2H4 156 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PRSS35Q8N3Z0 413 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ACBD7Q8N6N7 88 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 RELL2Q8NC24 303 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 OR6M1Q8NGM8 313 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 OR6K6Q8NGW6 343 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 OR13G1Q8NGZ3 307 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PFN4Q8NHR9 129 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NSMAFQ92636 917 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PIK3IP1Q96FE7 263 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NUDT11Q96G61 164 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PGAM5Q96HS1 289 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 RCC1LQ96I51 464 aaKnown RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NARS2Q96I59 477 aaKnown RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 HRASLS5Q96KN8 279 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ATF6BQ99941 703 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 JAM3Q9BX67 310 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CLEC4MQ9H2X3 399 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PLK3Q9H4B4 646 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 MEPEQ9NQ76 525 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PAK1IP1Q9NWT1 392 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 HIF1ANQ9NWT6 349 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 TVP23BQ9NYZ1 205 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 SEC14L4Q9UDX3 406 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 KCNK7Q9Y2U2 307 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 MPC1Q9Y5U8 109 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CROCCQ5TZA2 2017 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 DNAH12Q6ZR08 3092 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CENPVL1A0A0U1RR11 272 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ZC3H12DA2A288 527 aaKnown RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CCDC182A6NF36 153 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 GGT3PA6NGU5 568 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 SAC3D1A6NKF1 404 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ZAR1LA6NP61 321 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 SMLR1H3BR10 107 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 MYL12BO14950 172 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CLEC3BP05452 202 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NPSP0C0P6 89 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PIPP12273 146 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NQO2P16083 231 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF182P17025 639 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF25P17030 456 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 IGHV1-2P23083 117 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 MC5RP33032 325 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 GZMKP49863 264 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 RBP2P50120 134 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CCR6P51684 374 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CDK5Q00535 292 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 MS4A2Q01362 244 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NAAAQ02083 359 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 SLC9A3R2Q15599 337 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 MPPED2Q15777 294 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 C2orf76Q3KRA6 126 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 RBM48Q5RL73 367 aaKnown RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 VWA1Q6PCB0 445 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 COMMD7Q86VX2 200 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 LINC00346Q8IVM7 164 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 FAM89BQ8N5H3 189 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 LRRC75AQ8NAA5 344 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CYB561A3Q8NBI2 242 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 OR1M1Q8NGA1 313 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 OR10H4Q8NGA5 316 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NEK7Q8TDX7 302 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 SPRYD4Q8WW59 207 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 DEDD2Q8WXF8 326 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PLPPR2Q96GM1 343 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 Q96M85 177 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF48Q96MX3 618 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF582Q96NG8 517 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PSMG3-AS1Q96PY0 264 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 DOK1Q99704 481 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 CCL19Q99731 98 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 RHNO1Q9BSD3 238 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 FUZQ9BT04 418 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 OR2H1Q9GZK4 316 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 DNTTIP1Q9H147 329 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 RERGLQ9H628 205 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PLEKHA1Q9HB21 404 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 SIRT7Q9NRC8 400 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 NPAP1Q9NZP6 1156 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 LPAR3Q9UBY5 353 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PLEKHA6Q9Y2H5 1048 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 PEX16Q9Y5Y5 336 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 SPTBN4Q9H254 2564 aa3.12□□□□□ -1.91
PTPN22-211ENST00000538253 TRAV27A0A087WT01 109 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 DAPL1A0PJW8 107 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 A8MV72 311 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SHISA8B8ZZ34 492 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 DNASE2O00115 360 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SMAD7O15105 426 aaKnown RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 EFNA2O43921 213 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ATG12O94817 140 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms