RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 CRTAPO75718 401 aaPredicted RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 NME1P15531 152 aaKnown RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 RFC3P40938 356 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 ZP4Q12836 540 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 POC1AQ8NBT0 407 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 UQCC2Q9BRT2 126 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 KLHL13Q9P2N7 655 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 PCDHGA1Q9Y5H4 931 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 FBXO24O75426 580 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 FBLP22087 321 aaKnown RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 ACY1Q03154 408 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 MYBPHQ13203 477 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 AKIRIN2Q53H80 203 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 DEGS2Q6QHC5 323 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 LHFPL1Q86WI0 220 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 OIT3Q8WWZ8 545 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 DAZLQ92904 295 aaKnown RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 MRPL38Q96DV4 380 aaKnown RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 CDCA3Q99618 268 aaPredicted RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 MMP26Q9NRE1 261 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 COPS7AQ9UBW8 275 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 OSGIN2Q9Y236 505 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 SHANK1Q9Y566 2161 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 A0A1W2PR77 199 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 MED19A0JLT2 244 aaPredicted RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 COLCA2A8K830 154 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 TIAF1O95411 115 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 KNG1P01042 644 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 HOXA1P49639 335 aaPredicted RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 BLKP51451 505 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 DCAF7P61962 342 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 HGFACQ04756 655 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 PJVKQ0ZLH3 352 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 PDZK1IP1Q13113 114 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 PEG10Q86TG7 708 aaKnown RBP12.41□□□□□ -0.42
CLPB-209ENST00000538039 ADAMTS17Q8TE56 1095 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 SSC4DQ8WTU2 575 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 ARL11Q969Q4 196 aa12.41□□□□□ -0.42
CLPB-209ENST00000538039 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 LYL1P12980 280 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 FOSL1P15407 271 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 LAP3P28838 519 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 PTGER4P35408 488 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 CX3CR1P49238 355 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 S100A10P60903 97 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 PRSS54Q6PEW0 395 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 FAM57BQ71RH2 274 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 SMIM3Q9BZL3 60 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 A0A1B0GW55 424 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 A0A1W2PPE3 182 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 IGLV3-19P01714 112 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 CSTBP04080 98 aaKnown RBP12.4□□□□□ -0.42
CLPB-209ENST00000538039 GLAP06280 429 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 OR8U9P0C7N5 309 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 DUX4L2P0CJ85 424 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 DUX4L3P0CJ86 424 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 DUX4L4P0CJ87 422 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 DUX4L5P0CJ88 424 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 DUX4L6P0CJ89 424 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 DUX4L7P0CJ90 424 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 HKR1P10072 659 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 SLC6A9P48067 706 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 PNLIPRP3Q17RR3 467 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 RBMS3Q6XE24 437 aaKnown RBP12.4□□□□□ -0.42
CLPB-209ENST00000538039 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 DUX4Q9UBX2 424 aa12.4□□□□□ -0.42
CLPB-209ENST00000538039 IGHV1OR15-9A0A0B4J2B8 117 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 A6NIZ1 184 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 FCGR3AP08637 254 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 SFTA3P0C7M3 94 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 PGA4P0DJD7 388 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 PGA3P0DJD8 388 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 ZNF708P17019 499 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 DAP3P51398 398 aaKnown RBP12.39□□□□□ -0.43
CLPB-209ENST00000538039 RAP1BP61224 184 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 RAP1AP62834 184 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 NAAAQ02083 359 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 VAX1Q5SQQ9 334 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 KLHL24Q6TFL4 600 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 RAB11FIP2Q7L804 512 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 CCDC36Q8IYA8 594 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 SMIM8Q96KF7 97 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 TMEM59Q9BXS4 323 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 METTL8Q9H825 291 aaKnown RBP12.39□□□□□ -0.43
CLPB-209ENST00000538039 MCTS1Q9ULC4 181 aaKnown RBP12.39□□□□□ -0.43
CLPB-209ENST00000538039 ANKUB1A6NFN9 424 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 FOXI3A8MTJ6 420 aaPredicted RBP12.39□□□□□ -0.43
CLPB-209ENST00000538039 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 HPNP05981 417 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 SFTPBP07988 381 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 CBR1P16152 277 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 ZNF20P17024 532 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 FHITP49789 147 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 F2RL1P55085 397 aa12.39□□□□□ -0.43
CLPB-209ENST00000538039 HSD11B2P80365 405 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms