RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 DNAH7Q8WXX0 4024 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 hCG_1807616A0A1W2PRN6 198 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 LRRN3E7EW58 273 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 DLGAP1O14490 977 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 EI24O14681 340 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 LDLRAD4O15165 306 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 FMO6PO60774 539 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 HLA-DPB1P04440 258 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 IFNA6P05013 189 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 PPIBP23284 216 aaKnown RBP7.36□□□□□ -1.23
USP28-205ENST00000537706 AZGP1P25311 298 aaKnown RBP7.36□□□□□ -1.23
USP28-205ENST00000537706 APOFQ13790 326 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 NPTX1Q15818 432 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 NANOGNBQ7Z5D8 188 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 TMEM219Q86XT9 240 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 FAM86B1Q8N7N1 296 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 OR5M8Q8NGP6 311 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 AKR1E2Q96JD6 320 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 DCAF13Q9NV06 445 aaKnown RBP7.36□□□□□ -1.23
USP28-205ENST00000537706 SMPD3Q9NY59 655 aaPredicted RBP7.36□□□□□ -1.23
USP28-205ENST00000537706 UGT2A1Q9Y4X1 527 aa7.36□□□□□ -1.23
USP28-205ENST00000537706 NUP214P35658 2090 aaPredicted RBP7.36□□□□□ -1.23
USP28-205ENST00000537706 A0A1W2PPL8 197 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 NKX6-3A6NJ46 265 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 A6NLC8 198 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 SGCEO43556 437 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 CH25HO95992 272 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 MT-ND1P03886 318 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 MUC1P15941 1255 aaPredicted RBP7.35□□□□□ -1.23
USP28-205ENST00000537706 GPX2P18283 190 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 MSR1P21757 451 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 DLX1P56177 255 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 DSTNP60981 165 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 MAB21L1Q13394 359 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 GK3PQ14409 553 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 OVCH2Q7RTZ1 564 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 RANBP3LQ86VV4 465 aaPredicted RBP7.35□□□□□ -1.23
USP28-205ENST00000537706 FAM90A1Q86YD7 464 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 C10orf111Q8N326 155 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 SLC26A10Q8NG04 563 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 OR9Q1Q8NGQ5 310 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 ADAMTS16Q8TE57 1224 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 ASB10Q8WXI3 467 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 APOBEC3DQ96AK3 386 aaPredicted RBP7.35□□□□□ -1.23
USP28-205ENST00000537706 CCL13Q99616 98 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 C1orf123Q9NWV4 160 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 DNAJB9Q9UBS3 223 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 ZNF229Q9UJW7 825 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 SMIM31A0A1B0GVY4 71 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 CLIC1O00299 241 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 LY6G6CO95867 125 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 FRMD6-AS1P0C7T7 363 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 GRK5P34947 590 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 CAPGP40121 348 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 MAGEA2P43356 314 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 LUMP51884 338 aaPredicted RBP7.35□□□□□ -1.23
USP28-205ENST00000537706 BLCAPP62952 87 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 IKZF1Q13422 519 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 OR1Q1Q15612 314 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 MPPED2Q15777 294 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 SLC36A3Q495N2 470 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 PLA1AQ53H76 456 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 RPS26P11Q5JNZ5 115 aaPredicted RBP7.35□□□□□ -1.23
USP28-205ENST00000537706 TEX36Q5VZQ5 186 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 C11orf42Q8N5U0 333 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 BBS10Q8TAM1 723 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 PIFOQ8TCI5 191 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 SPRYD4Q8WW59 207 aaPredicted RBP7.35□□□□□ -1.23
USP28-205ENST00000537706 RDH12Q96NR8 316 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 EVA1AQ9H8M9 152 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 INIPQ9NRY2 104 aa7.35□□□□□ -1.23
USP28-205ENST00000537706 SAMD4AQ9UPU9 718 aaKnown RBP7.35□□□□□ -1.23
USP28-205ENST00000537706 A0A0B4J2E0 115 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.34□□□□□ -1.23
USP28-205ENST00000537706 A0A1B0GX12 115 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 hCG_1809904A0A1W2PP81 198 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 A0A1W2PPE2 198 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 A0A1W2PPH5 198 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 A0A1W2PR64 198 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 A0A1W2PRV1 198 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 C5orf58C9J3I9 102 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 BLOC1S5-TXNDC5H3BN57 136 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 SERPINA1P01009 418 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 HTR2AP28223 471 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 PRKAR1BP31321 381 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 RPL5P46777 297 aaKnown RBP7.34□□□□□ -1.23
USP28-205ENST00000537706 ALDH3A2P51648 485 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 RPL23AP62750 156 aaKnown RBP7.34□□□□□ -1.23
USP28-205ENST00000537706 ZNF74Q16587 644 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 VMACQ2NL98 169 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 KCTD21Q4G0X4 260 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 TTC33Q6PID6 262 aaPredicted RBP7.34□□□□□ -1.23
USP28-205ENST00000537706 ARMC8Q8IUR7 673 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 SLC38A5Q8WUX1 472 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 LINC00476Q8WZB0 136 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 TMEM19Q96HH6 336 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 ALG12Q9BV10 488 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 SPATA5L1Q9BVQ7 753 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 TPT1P8Q9HAU6 139 aa7.34□□□□□ -1.23
USP28-205ENST00000537706 ZFP57Q9NU63 452 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms