RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ANGPTL4Q9BY76 406 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 LINC01387J3KSC0 135 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TMPRSS11DO60235 418 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 VSIG10L2P0DP72 767 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 SELLP14151 372 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 BCL6P41182 706 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 NUBP1P53384 320 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 PTTG1IPP53801 180 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 PPP2CBP62714 309 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 PPP2CAP67775 309 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 POU3F1Q03052 451 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF385CQ66K41 422 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 SLC48A1Q6P1K1 146 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 LGI3Q8N145 548 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OR2D3Q8NGH3 330 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OR1E3Q8WZA6 343 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 PPIL1Q9Y3C6 166 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 IDSB3KWA1 339 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 SLC17A2O00624 439 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ITGB1BP1O14713 200 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ICOSLGO75144 302 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OPN1MWP04001 364 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OPN1MW2P0DN77 364 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OPN1MW3P0DN78 364 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 DAP3P51398 398 aaKnown RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 RAB38P57729 211 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF90Q03938 601 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 NCR3LG1Q68D85 454 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM25Q86YD3 366 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CARFQ8N187 725 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OR4F5Q8NH21 305 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 PIGTQ969N2 578 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 SNX22Q96L94 193 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CASD1Q96PB1 797 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 DCBLD2Q96PD2 775 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OR4F4Q96R69 305 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 INSM2Q96T92 566 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ZFYVE21Q9BQ24 234 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 SMIM7Q9BQ49 75 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 VDAC3Q9Y277 283 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 KCNE3Q9Y6H6 103 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 C20orf202A1L168 122 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ABHD16AO95870 558 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ACTL6AO96019 429 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 GUSBP08236 651 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 DBHP09172 617 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 SGCBQ16585 318 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM31Q5JXX7 168 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 DPPA3Q6W0C5 159 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM184AQ6ZMB5 413 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 FAM160A2Q8N612 972 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 R3HDMLQ9H3Y0 253 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CD207Q9UJ71 328 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 STARD10Q9Y365 291 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ADAMTSL1Q8N6G6 1762 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1W2PP55 124 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 MYADML2A6NDP7 307 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 HSD17B6O14756 317 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ADAP1O75689 374 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CTSAP10619 480 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 LYL1P12980 280 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 NTF3P20783 257 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TPPP2P59282 170 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ACOT6Q3I5F7 207 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM128Q5BJH2 165 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CLLU1OSQ5K130 101 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 SLC35E3Q7Z769 313 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 SIGLECL1Q8N7X8 197 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 GPBAR1Q8TDU6 330 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 GALNT14Q96FL9 552 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 MAGT1Q9H0U3 335 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 VAX2Q9UIW0 290 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ST6GALNAC2Q9UJ37 374 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 NYNRINQ9P2P1 1898 aaKnown RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 XIRP1Q702N8 1843 aaKnown RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TRAPPC6AO75865 159 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CHRM2P08172 466 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ACKR1Q16570 336 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ADIPOR2Q86V24 386 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 C19orf47Q8N9M1 422 aaKnown RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OR10G4Q8NGN3 311 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TSLPQ969D9 159 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 IL22RA2Q969J5 263 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ANKRD9Q96BM1 317 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF576Q9H609 170 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 NECAP2Q9NVZ3 263 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CHRNA9Q9UGM1 479 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 MYO10Q9HD67 2058 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 LRP5LA4QPB2 252 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 OTOL1A6NHN0 477 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 C17orf105B2RV13 164 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 SSSCA1O60232 199 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 HMGA1P17096 107 aaKnown RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ACKR3P25106 362 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 DUSP1P28562 367 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 NKX2-1P43699 371 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PHYHD1Q5SRE7 291 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 TSACCQ96A04 125 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PELI1Q96FA3 418 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 IGSF21Q96ID5 467 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms