RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PSMA6P60900 246 aaKnown RBP8.69□□□□□ -1.02
CAPN1-225ENST00000533704 FGF12P61328 243 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 UBA52P62987 128 aaKnown RBP8.69□□□□□ -1.02
CAPN1-225ENST00000533704 PAX2Q02962 417 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 BNIP1Q12981 228 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 BAMBIQ13145 260 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 PRDX4Q13162 271 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 LCN1P1Q5VSP4 162 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 C1orf146Q5VVC0 180 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 BRD3OSQ6XYD6 125 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 WDR86Q86TI4 376 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 FTMTQ8N4E7 242 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 GCSAMQ8N6F7 178 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 C3orf56Q8N813 242 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 PLPP7Q8NBV4 271 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 OR8B12Q8NGG6 310 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 FAM81AQ8TBF8 368 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 DNAJC9Q8WXX5 260 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 PIGCQ92535 297 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 NRBF2Q96F24 287 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF48Q96MX3 618 aaPredicted RBP8.69□□□□□ -1.02
CAPN1-225ENST00000533704 PCGF1Q9BSM1 259 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 RGCCQ9H4X1 137 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 TRIM36Q9NQ86 728 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 KRT84Q9NSB2 600 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 IKZF2Q9UKS7 526 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 LRP12Q9Y561 859 aa8.69□□□□□ -1.02
CAPN1-225ENST00000533704 NBEAL1Q6ZS30 2694 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 MDFIC2A0A1B0GVS7 189 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 DNAJC9-AS1A6NH13 148 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF850A8MQ14 1090 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 TMPRSS2O15393 492 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 PRKYO43930 277 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 ALOX5APP20292 161 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 ACKR3P25106 362 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 CFPP27918 469 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 PSMB10P40306 273 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 NPY4RP50391 375 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 ELF3P78545 371 aaPredicted RBP8.68□□□□□ -1.02
CAPN1-225ENST00000533704 IL5RAQ01344 420 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 PTGES3Q15185 160 aaKnown RBP8.68□□□□□ -1.02
CAPN1-225ENST00000533704 SNCBQ16143 134 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 CD276Q5ZPR3 534 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 FAHD1Q6P587 224 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 KCTD18Q6PI47 426 aaPredicted RBP8.68□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF841Q6ZN19 808 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 RHOUQ7L0Q8 258 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 DOK3Q7L591 496 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 BCDIN3DQ7Z5W3 292 aaKnown RBP8.68□□□□□ -1.02
CAPN1-225ENST00000533704 AMIGO2Q86SJ2 522 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 FAM90A1Q86YD7 464 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 OR1M1Q8NGA1 313 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 ST8SIA4Q92187 359 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
CAPN1-225ENST00000533704 UPRTQ96BW1 309 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 SEH1LQ96EE3 360 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 LYZL4Q96KX0 146 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 CNN2Q99439 309 aaKnown RBP8.68□□□□□ -1.02
CAPN1-225ENST00000533704 RTL8AQ9BWD3 113 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 PRRG3Q9BZD7 231 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 YIPF3Q9GZM5 350 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 NIPAL2Q9H841 368 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 SMURF1Q9HCE7 757 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 GTF2A1LQ9UNN4 478 aa8.68□□□□□ -1.02
CAPN1-225ENST00000533704 TMEM269A0A1B0GVZ9 245 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 TMEM89A2RUT3 159 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 CCDC182A6NF36 153 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 G3V2T6 193 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 DVL1O14640 695 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 CDIPTO14735 213 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 NDUFA2O43678 99 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 CIB2O75838 187 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 SFTPBP07988 381 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 FASP25445 335 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 MTNR1AP48039 350 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 ATP6AP1Q15904 470 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 MICBQ29980 383 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 GPR157Q5UAW9 335 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 RUSC1-AS1Q66K80 236 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 WDR82Q6UXN9 313 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 C11orf53Q8IXP5 236 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 TCEANCQ8N8B7 351 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 RPL3LQ92901 407 aaKnown RBP8.67□□□□□ -1.02
CAPN1-225ENST00000533704 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 DACT3Q96B18 629 aaPredicted RBP8.67□□□□□ -1.02
CAPN1-225ENST00000533704 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 RNF170Q96K19 258 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 FAM71F1Q96KD3 344 aaPredicted RBP8.67□□□□□ -1.02
CAPN1-225ENST00000533704 HIST1H2AAQ96QV6 131 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 TEAD3Q99594 435 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 CCL13Q99616 98 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 PKP2Q99959 881 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 MROQ9BYG7 248 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 RNPEPL1Q9HAU8 725 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 TNFRSF19Q9NS68 423 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 SNTG1Q9NSN8 517 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 H2AFY2Q9P0M6 372 aaPredicted RBP8.67□□□□□ -1.02
CAPN1-225ENST00000533704 COPS3Q9UNS2 423 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 AP4S1Q9Y587 144 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms