RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CSPG4Q6UVK1 2322 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 IRGMA1A4Y4 181 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 P2RY10O00398 339 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 PPIHO43447 177 aaKnown RBP10.12□□□□□ -0.79
SSBP3-214ENST00000533209 RRP9O43818 475 aaKnown RBP10.12□□□□□ -0.79
SSBP3-214ENST00000533209 PTBP3O95758 552 aaKnown RBP10.12□□□□□ -0.79
SSBP3-214ENST00000533209 CST4P01036 141 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 PIPP12273 146 aaPredicted RBP10.12□□□□□ -0.79
SSBP3-214ENST00000533209 CCL1P22362 96 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 MYF6P23409 242 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 VHLP40337 213 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 PMELP40967 661 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 GATA4P43694 442 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 NANOS3P60323 173 aaKnown RBP10.12□□□□□ -0.79
SSBP3-214ENST00000533209 MVKQ03426 396 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 C6orf141Q5SZD1 244 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 COMMD2Q86X83 199 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 SPERTQ8NA61 448 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 SEMA6DQ8NFY4 1073 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 MYCBPQ99417 103 aaPredicted RBP10.12□□□□□ -0.79
SSBP3-214ENST00000533209 PAPOLGQ9BWT3 736 aaKnown RBP10.12□□□□□ -0.79
SSBP3-214ENST00000533209 ANKRD60Q9BZ19 345 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 TMEM106BQ9NUM4 274 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 CNOT2Q9NZN8 540 aaKnown RBP10.12□□□□□ -0.79
SSBP3-214ENST00000533209 FRRS1LQ9P0K9 344 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 V9GYS6 101 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 MED13LQ71F56 2210 aa10.12□□□□□ -0.79
SSBP3-214ENST00000533209 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-214ENST00000533209 LOC100289279A0A1B0GTE1 492 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 EFCAB10A6NFE3 127 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 ZNF850A8MQ14 1090 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 CLDN25C9JDP6 229 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 E9PI62 339 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 WNT9BO14905 357 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 MTRF1O75570 445 aaKnown RBP10.11□□□□□ -0.79
SSBP3-214ENST00000533209 DHRS3O75911 302 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 HTR1AP08908 422 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 FAHP16930 419 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 GNALP38405 381 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 KRTAP1-1Q07627 177 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 SLC3A1Q07837 685 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 RIPPLY1Q0D2K3 151 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 ST3GAL4Q11206 333 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 PRDX4Q13162 271 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 MPPED2Q15777 294 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 SNCBQ16143 134 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 ODF4Q2M2E3 257 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 AVPI1Q5T686 147 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 ZBTB37Q5TC79 503 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 PRAMEF6Q5VXH4 476 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 DOK3Q7L591 496 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 WDR86Q86TI4 376 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 BIVMQ86UB2 503 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 MOGAT3Q86VF5 341 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 FTMTQ8N4E7 242 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 BPIFB6Q8NFQ5 453 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 ZNF420Q8TAQ5 688 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-214ENST00000533209 ITPKCQ96DU7 683 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 TMEM80Q96HE8 168 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 FGF23Q9GZV9 251 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-214ENST00000533209 GSX1Q9H4S2 264 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-214ENST00000533209 FKBP14Q9NWM8 211 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 PIGLQ9Y2B2 252 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 CAB39Q9Y376 341 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-214ENST00000533209 EXOSC1Q9Y3B2 195 aaKnown RBP10.11□□□□□ -0.79
SSBP3-214ENST00000533209 WIPI2Q9Y4P8 454 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 MPC1Q9Y5U8 109 aa10.11□□□□□ -0.79
SSBP3-214ENST00000533209 TLN2Q9Y4G6 2542 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 ZNF816-ZNF321PA0A0X1KG74 233 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 A0A1B0GVI7 797 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 LOC107986453A0A1B0GWG9 222 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 LRP5LA4QPB2 252 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 OR4C45A6NMZ5 311 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 TMEM178BH3BS89 294 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 IFNL4K9M1U5 179 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 LY6G6DO95868 133 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 IL2RGP31785 369 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 CCR9P51686 369 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 CHN2P52757 468 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 ALKBH1Q13686 389 aaKnown RBP10.1□□□□□ -0.79
SSBP3-214ENST00000533209 ZNF181Q2M3W8 571 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 TMEM249Q2WGJ8 235 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 OR2G6Q5TZ20 316 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 RDH10Q8IZV5 341 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 OR14K1Q8NGZ2 314 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 OR8S1Q8NH09 359 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 Q8TCH9 128 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 HPSE2Q8WWQ2 592 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 OR5P3Q8WZ94 311 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 PIGCQ92535 297 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 RAB1CQ92928 201 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 ERGIC1Q969X5 290 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 TIMD4Q96H15 378 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 ABCB9Q9NP78 766 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 UFSP2Q9NUQ7 469 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 C14orf119Q9NWQ9 140 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 CLEC2DQ9UHP7 191 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 ENPP5Q9UJA9 477 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 RAB26Q9ULW5 256 aa10.1□□□□□ -0.79
SSBP3-214ENST00000533209 NPTNQ9Y639 398 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms