RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 A6NLC8 198 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 F5H0A9 414 aaPredicted RBP14.59□□□□□ -0.07
CTSB-223ENST00000532370 PPIAL4DF5H284 164 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 DLGAP1O14490 977 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 RRP9O43818 475 aaKnown RBP14.59□□□□□ -0.07
CTSB-223ENST00000532370 RPP14O95059 124 aaKnown RBP14.59□□□□□ -0.07
CTSB-223ENST00000532370 AVPP01185 164 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 PPIAL4FP0DN26 164 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 IRF2P14316 349 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 SRD5A1P18405 259 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 GABRB1P18505 474 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 GNALP38405 381 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 MTNR1AP48039 350 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 CSNK2BP67870 215 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 PRDX4Q13162 271 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 OCLNQ16625 522 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 LRRC36Q1X8D7 754 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 DMRTC1Q5HYR2 192 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 ZNF684Q5T5D7 378 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 SFRP4Q6FHJ7 346 aaPredicted RBP14.59□□□□□ -0.07
CTSB-223ENST00000532370 COMMD2Q86X83 199 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 ENTHD1Q8IYW4 607 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 C1orf87Q8N0U7 546 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 GALNT4Q8N4A0 578 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 PLPP7Q8NBV4 271 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 PIGCQ92535 297 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 ITPKCQ96DU7 683 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 RNFT2Q96EX2 444 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 FAM71F1Q96KD3 344 aaPredicted RBP14.59□□□□□ -0.07
CTSB-223ENST00000532370 TMEM246Q9BRR3 403 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 METTL17Q9H7H0 456 aaPredicted RBP14.59□□□□□ -0.07
CTSB-223ENST00000532370 C14orf119Q9NWQ9 140 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 FAM118AQ9NWS6 357 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 RNF7Q9UBF6 113 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 NUFIP1Q9UHK0 495 aaKnown RBP14.59□□□□□ -0.07
CTSB-223ENST00000532370 PPIAL4AQ9Y536 164 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 DYSFO75923 2080 aa14.59□□□□□ -0.07
CTSB-223ENST00000532370 LOC100130705A0A1B0GUX0 176 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 LOC110117498-PIK3R3F6TDL0 507 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 PHF1O43189 567 aaPredicted RBP14.58□□□□□ -0.08
CTSB-223ENST00000532370 CST4P01036 141 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 IGLV3-1P01715 115 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 TTRP02766 147 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 WNT2P09544 360 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 HNF1AP20823 631 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 CD80P33681 288 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 ZNF85Q03923 595 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 TMED1Q13445 227 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 RCN1Q15293 331 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 ZNF404Q494X3 552 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 LPCAT4Q643R3 524 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 LYPD2Q6UXB3 125 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 C1orf229Q6ZS94 237 aaPredicted RBP14.58□□□□□ -0.08
CTSB-223ENST00000532370 MUC20Q8N307 709 aaPredicted RBP14.58□□□□□ -0.08
CTSB-223ENST00000532370 YIPF7Q8N8F6 280 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 OR1M1Q8NGA1 313 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 MMP26Q9NRE1 261 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 ZNF391Q9UJN7 358 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 OR52A1Q9UKL2 312 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.58□□□□□ -0.08
CTSB-223ENST00000532370 SLC22A13Q9Y226 551 aa14.58□□□□□ -0.08
CTSB-223ENST00000532370 hCG_1807616A0A1W2PRN6 198 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 METTL15A6NJ78 407 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 C3orf80F5H4A9 247 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 TRAPPC2LH3BP13 241 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 J3QRE1 110 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 KRT8P05787 483 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 THBS2P35442 1172 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 ELF3P78545 371 aaPredicted RBP14.57□□□□□ -0.08
CTSB-223ENST00000532370 MZT1Q08AG7 82 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 ZNF154Q13106 437 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 BCL2L15Q5TBC7 163 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 LIPNQ5VXI9 398 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 MEDAGQ5VYS4 303 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 ELMOD2Q8IZ81 293 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 RHOXF1Q8NHV9 184 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 HPSE2Q8WWQ2 592 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 OR5P3Q8WZ94 311 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 TMPRSS13Q9BYE2 586 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 AMBNQ9NP70 447 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 MPC1Q9Y5U8 109 aa14.57□□□□□ -0.08
CTSB-223ENST00000532370 A0A1B0GTI1 187 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 P2RY10O00398 339 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 CDIPTO14735 213 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 FSTL3O95633 263 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 RPS2P15880 293 aaKnown RBP14.56□□□□□ -0.08
CTSB-223ENST00000532370 FAHP16930 419 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 EGR1P18146 543 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 PCMT1P22061 227 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 SRP14P37108 136 aaKnown RBP14.56□□□□□ -0.08
CTSB-223ENST00000532370 MAP2K3P46734 347 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 IL5RAQ01344 420 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 ODF4Q2M2E3 257 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 TP53I3Q53FA7 332 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 CEP78Q5JTW2 689 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 FTMTQ8N4E7 242 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 GCSAMQ8N6F7 178 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 SEMA6DQ8NFY4 1073 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 RORBQ92753 470 aa14.56□□□□□ -0.08
CTSB-223ENST00000532370 RNF166Q96A37 237 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms