RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	PIK3R3	Q92569	461 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	GTF3A	Q92664	365 aa	Known RBP	4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	EXOSC8	Q96B26	276 aa	Known RBP	4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	SGK3	Q96BR1	496 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	CXorf58	Q96LI9	332 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	GPR22	Q99680	433 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	RBBP8	Q99708	897 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	NDUFAF3	Q9BU61	184 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	RBM38	Q9H0Z9	239 aa	Known RBP	4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	HIPK2	Q9H2X6	1198 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	DYNLRB1	Q9NP97	96 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	UBQLN4	Q9NRR5	601 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	SLC7A10	Q9NS82	523 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	UFSP2	Q9NUQ7	469 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	ZNF580	Q9UK33	172 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	WDR45	Q9Y484	360 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	LRP12	Q9Y561	859 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	DNAH3	Q8TD57	4116 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	RYR2	Q92736	4967 aa		4.71	□□□□□ -1.66
PUM1-222	ENST00000531867	SH3PXD2B	A1X283	911 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	TMEM178B	H3BS89	294 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	HSPA12A	O43301	675 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	ZSCAN12	O43309	604 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	PPIH	O43447	177 aa	Known RBP	4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	SUPT3H	O75486	399 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	KCNK2	O95069	426 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	IL3	P08700	152 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	PPIAL4G	P0DN37	164 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	FCGR1A	P12314	374 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	IVD	P26440	423 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	CDKN2A	P42771	156 aa	Known RBP	4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	RAG2	P55895	527 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	CLDN17	P56750	224 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	BNIP1	Q12981	228 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	TRAF3	Q13114	568 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	EXOSC2	Q13868	293 aa	Known RBP	4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	SPHAR	Q15513	63 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	FAM189A2	Q15884	450 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	ODF4	Q2M2E3	257 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	HIKESHI	Q53FT3	197 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	C9orf135	Q5VTT2	229 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	PLCXD3	Q63HM9	321 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	C3orf33	Q6P1S2	294 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	FAM122C	Q6P4D5	195 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	C6orf89	Q6UWU4	347 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	TMEM107	Q6UX40	140 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867		Q75L30	129 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	CCDC80	Q76M96	950 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	TMEM139	Q8IV31	216 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	FOXRED2	Q8IWF2	684 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	CCDC36	Q8IYA8	594 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	PIGX	Q8TBF5	258 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	GLYATL2	Q8WU03	294 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	MRPL53	Q96EL3	112 aa	Known RBP	4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	AKR1E2	Q96JD6	320 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	OR5B2	Q96R09	309 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	KCNS3	Q9BQ31	491 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	SF3B5	Q9BWJ5	86 aa	Known RBP	4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	TPK1	Q9H3S4	243 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	GLIPR2	Q9H4G4	154 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	ZNF385D	Q9H6B1	395 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	NMRAL1	Q9HBL8	299 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	FLVCR1	Q9Y5Y0	555 aa		4.7	□□□□□ -1.66
PUM1-222	ENST00000531867	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	SNTN	A6NMZ2	147 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	SYCE1L	A8MT33	242 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	TRIM49D1	C9J1S8	452 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867		M0R233	179 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	SULT2B1	O00204	365 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	TRAF3IP2	O43734	574 aa	Predicted RBP	4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	PMS2P2	O95744	297 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	PDYN	P01213	254 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	LYN	P07948	512 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	CBR1	P16152	277 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	UCP1	P25874	307 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	CCT3	P49368	545 aa	Known RBP	4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	RAB9A	P51151	201 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	ATP4B	P51164	291 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	NCBP2	P52298	156 aa	Known RBP eCLIP	4.69	□□□□□ -1.66	5e-8	■□□□□ 9.5
PUM1-222	ENST00000531867	ZNF415	Q09FC8	603 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	KLHL22	Q53GT1	634 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	CCDC137	Q6PK04	289 aa	Known RBP	4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	MYPOP	Q86VE0	399 aa	Predicted RBP	4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	ZIC4	Q8N9L1	334 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	ATP6V1C2	Q8NEY4	427 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	OR5AU1	Q8NGC0	362 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	OR1K1	Q8NGR3	316 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	OR5W2	Q8NH69	310 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	GPR151	Q8TDV0	419 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	C16orf78	Q8WTQ4	265 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	SLC38A5	Q8WUX1	472 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	LIPH	Q8WWY8	451 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	TMEM37	Q8WXS4	190 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	PIGC	Q92535	297 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	MAGOHB	Q96A72	148 aa	Known RBP	4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	AMDHD1	Q96NU7	426 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	PANX1	Q96RD7	426 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	C5orf66	Q9H5L9	145 aa		4.69	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms