RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 EDA2RQ9HAV5 297 aa6.55□□□□□ -1.36
CD44-232ENST00000531118 ADA2Q9NZK5 511 aa6.55□□□□□ -1.36
CD44-232ENST00000531118 TRAV27A0A087WT01 109 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 SIGLEC5O15389 551 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 PAX4O43316 350 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 NDUFB7P17568 137 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 ANOS1P23352 680 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 ECI1P42126 302 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 POLR2JP52435 117 aaKnown RBP6.54□□□□□ -1.36
CD44-232ENST00000531118 LGALS4P56470 323 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 CAV3P56539 151 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 HIST1H3AP68431 136 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 MZT1Q08AG7 82 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 LRIF1Q5T3J3 769 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 ATPAF1Q5TC12 328 aaPredicted RBP6.54□□□□□ -1.36
CD44-232ENST00000531118 HIST2H3PS2Q5TEC6 136 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 WDR82Q6UXN9 313 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 ZNF788Q6ZQV5 615 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 C18orf65Q6ZTR6 163 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 HIST2H3AQ71DI3 136 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 OR52H1Q8NGJ2 320 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 TMEM239Q8WW34 195 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 DDB2Q92466 427 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 P2RX4Q99571 388 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 DNTTIP1Q9H147 329 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 WDR55Q9H6Y2 383 aaPredicted RBP6.54□□□□□ -1.36
CD44-232ENST00000531118 C14orf119Q9NWQ9 140 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 MRPL15Q9P015 296 aaKnown RBP6.54□□□□□ -1.36
CD44-232ENST00000531118 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.54□□□□□ -1.36
CD44-232ENST00000531118 ZNF391Q9UJN7 358 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 RPS6KA6Q9UK32 745 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 LHFPL6Q9Y693 200 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 SMAD5-AS1Q9Y6J3 95 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 DNAH6Q9C0G6 4158 aa6.54□□□□□ -1.36
CD44-232ENST00000531118 TRBV5-3A0A0A0MS03 114 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 FAM90A8PA6NJQ4 464 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 GLCEO94923 617 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 LCATP04180 440 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 PPIBP23284 216 aaKnown RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 AZGP1P25311 298 aaKnown RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 POU1F1P28069 291 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 SDHAP31040 664 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 GRK5P34947 590 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 MYCNOSP40205 109 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 SLC1A6P48664 564 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 MXRA7P84157 204 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 IFFO1Q0D2I5 559 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 SELPLGQ14242 412 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 MEP1BQ16820 701 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 RSPO1Q2MKA7 263 aaPredicted RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 CORO6Q6QEF8 472 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 OR2W3Q7Z3T1 314 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 GLB1L2Q8IW92 636 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 C11orf53Q8IXP5 236 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 MICU2Q8IYU8 434 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 OR5T2Q8NGG2 359 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 OR56B2PQ8NGI1 322 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 OR2AE1Q8NHA4 323 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 OR5K1Q8NHB7 308 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 ZNF570Q96NI8 536 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 RAB3IPQ96QF0 476 aaPredicted RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 ZMAT4Q9H898 229 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 HEXA-AS1Q9H8Q6 139 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 SDR39U1Q9NRG7 319 aaPredicted RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 C19orf12Q9NSK7 152 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 SNTG1Q9NSN8 517 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 PNPOQ9NVS9 261 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 FAM53CQ9NYF3 392 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 ZNF256Q9Y2P7 627 aaPredicted RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 COA3Q9Y2R0 106 aaPredicted RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 MED31Q9Y3C7 131 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 ADAM18Q9Y3Q7 739 aa6.53□□□□□ -1.36
CD44-232ENST00000531118 TBL2Q9Y4P3 447 aaKnown RBP6.53□□□□□ -1.36
CD44-232ENST00000531118 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
CD44-232ENST00000531118 PRSS37A4D1T9 235 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 GGT3PA6NGU5 568 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 NUDT19A8MXV4 375 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 ODF3BA8MYP8 253 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 F5H5K5 113 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 BHLHE40O14503 412 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 XKRYO14609 159 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 TYROBPO43914 113 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 KHDRBS3O75525 346 aaKnown RBP6.52□□□□□ -1.37
CD44-232ENST00000531118 OR5F1O95221 314 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 LPLP06858 475 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 GGT2P36268 569 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 CEBPDP49716 269 aaPredicted RBP6.52□□□□□ -1.37
CD44-232ENST00000531118 DYNLT3P51808 116 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 RAB25P57735 213 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 TAS2R41P59536 307 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 GMFBP60983 142 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 SPIBQ01892 262 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 ZNF92Q03936 586 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 TRAP1Q12931 704 aaKnown RBP6.52□□□□□ -1.37
CD44-232ENST00000531118 KRR1Q13601 381 aaKnown RBP6.52□□□□□ -1.37
CD44-232ENST00000531118 FHL1Q13642 323 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 SNAI3Q3KNW1 292 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 LDLRAD2Q5SZI1 272 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 C9orf66Q5T8R8 295 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms