RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CA5BP1Q8WTZ4 195 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 GMPPAQ96IJ6 420 aaPredicted RBP13.35□□□□□ -0.27
USP47-207ENST00000527733 CYSLTR2Q9NS75 346 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 C1orf123Q9NWV4 160 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 NTN3O00634 580 aaPredicted RBP13.35□□□□□ -0.27
USP47-207ENST00000527733 MFGE8Q08431 387 aaPredicted RBP13.35□□□□□ -0.27
USP47-207ENST00000527733 ACSM1Q08AH1 577 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 TMEM108Q6UXF1 575 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 FBXW12Q6X9E4 464 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 CMTM3Q96MX0 182 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 RBM38Q9H0Z9 239 aaKnown RBP13.35□□□□□ -0.27
USP47-207ENST00000527733 TREM1Q9NP99 234 aa13.35□□□□□ -0.27
USP47-207ENST00000527733 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 ANKRD33BA6NCL7 494 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 SIRPB1O00241 398 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 OPRM1P35372 400 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 MAGEB1P43366 347 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 IRF3Q14653 427 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 C20orf85Q9H1P6 137 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 AKIP1Q9NQ31 210 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 CD59P13987 128 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 GPM6AP51674 278 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 FBXW9Q5XUX1 488 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 LILRB2Q8N423 598 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 RNF133Q8WVZ7 376 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 HGDQ93099 445 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 NPIPB9F8W1W9 429 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 TERTO14746 1132 aaKnown RBP13.34□□□□□ -0.27
USP47-207ENST00000527733 SFTPCP11686 197 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 RRAS2P62070 204 aaPredicted RBP13.34□□□□□ -0.27
USP47-207ENST00000527733 OR10J5Q8NHC4 309 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 MPPED1O15442 326 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 SPRY1O43609 319 aaPredicted RBP13.34□□□□□ -0.27
USP47-207ENST00000527733 GNB3P16520 340 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 CD79BP40259 229 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 PMP22Q01453 160 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 DYRK1AQ13627 763 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 Q6ZNX1 250 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 CCDC190Q86UF4 302 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 STX12Q86Y82 276 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 OR8B12Q8NGG6 310 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 OR5H6Q8NGV6 325 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 RND1Q92730 232 aa13.34□□□□□ -0.27
USP47-207ENST00000527733 RIMS4Q9H426 269 aaPredicted RBP13.34□□□□□ -0.27
USP47-207ENST00000527733 METTL17Q9H7H0 456 aaPredicted RBP13.34□□□□□ -0.27
USP47-207ENST00000527733 A0A1W2PPH5 198 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 FAM90A27PA6NNH2 459 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 CCL2P13500 99 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 IL11P20809 199 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 BTG1P62324 171 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 ZMYND11Q15326 602 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 OR13G1Q8NGZ3 307 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 ZPLD1Q8TCW7 415 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 ADAT1Q9BUB4 502 aaKnown RBP13.33□□□□□ -0.27
USP47-207ENST00000527733 SRRQ9GZT4 340 aa13.33□□□□□ -0.27
USP47-207ENST00000527733 MEIKINA0A087WXM9 373 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 OR4C45A6NMZ5 311 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 GPR137BO60478 399 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 CSF3P09919 207 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 TBPP20226 339 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 RPL23AP62750 156 aaKnown RBP13.33□□□□□ -0.28
USP47-207ENST00000527733 SMIM21Q3B7S5 101 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 FBXL14Q8N1E6 418 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 GLYATL2Q8WU03 294 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 SMIM4Q8WVI0 70 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 DEDD2Q8WXF8 326 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 IMMP1LQ96LU5 166 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 SLC17A5Q9NRA2 495 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 FRRS1LQ9P0K9 344 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 FAM76BQ5HYJ3 339 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 TSPO2Q5TGU0 170 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 FBXO17Q96EF6 278 aa13.33□□□□□ -0.28
USP47-207ENST00000527733 SERPINE3A8MV23 424 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 ATP6V1G1O75348 118 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 TNFRSF1AP19438 455 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 MMP16P51512 607 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 TMPRSS3P57727 454 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 DBPQ10586 325 aaPredicted RBP13.32□□□□□ -0.28
USP47-207ENST00000527733 COL19A1Q14993 1142 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 GPR27Q9NS67 375 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 CRYBA2P53672 197 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 PTGFRP43088 359 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 GABRA4P48169 554 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 SCAND1P57086 179 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 BCL2A1Q16548 175 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 AMDHD2Q9Y303 409 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 PRELID3BQ9Y3B1 194 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 ANAPC1Q9H1A4 1944 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 IGKV1D-42A0A075B6H8 117 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 FAM221AA4D161 298 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 SCGB2A1O75556 95 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 OR8U9P0C7N5 309 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 CA6P23280 308 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 NFYBP25208 207 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 PPP1CBP62140 327 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 PRDX4Q13162 271 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 GGTLC2Q14390 218 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 KRTCAP3Q53RY4 240 aa13.32□□□□□ -0.28
USP47-207ENST00000527733 OR2W3Q7Z3T1 314 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms