RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 EBPQ15125 230 aaKnown RBP11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SLC29A4Q7RTT9 530 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 GALNTL5Q7Z4T8 443 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 OR51E1Q8TCB6 317 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 CRB3Q9BUF7 120 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 SEC61A2Q9H9S3 476 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 COPS7AQ9UBW8 275 aa11.09□□□□□ -0.63
CAPN1-208ENST00000527323 LRP4O75096 1905 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 PRSS44E7EML9 344 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 RNASEK-C17orf49H0YIS7 233 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 LRP3O75074 770 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 NPIPB7O75200 414 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 FBXO24O75426 580 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 SFT2D2O95562 160 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 MMP16P51512 607 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 DCDP81605 110 aaKnown RBP11.08□□□□□ -0.64
CAPN1-208ENST00000527323 DMRTC1Q5HYR2 192 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 PRSS54Q6PEW0 395 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 RNF144BQ7Z419 303 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 LYPD6Q86Y78 171 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 C9orf40Q8IXQ3 194 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 OR5H2Q8NGV7 314 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 LILRB1Q8NHL6 650 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-208ENST00000527323 NRIP2Q9BQI9 281 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 C5orf66Q9H5L9 145 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 CUTCQ9NTM9 273 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 FAM86C1Q9NVL1 165 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 EDARQ9UNE0 448 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 MRPS28Q9Y2Q9 187 aaKnown RBP11.08□□□□□ -0.64
CAPN1-208ENST00000527323 FLVCR1Q9Y5Y0 555 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 SDCBPO00560 298 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-208ENST00000527323 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 HCKP08631 526 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 SLC2A1P11166 492 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 AMY2BP19961 511 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 ABCD3P28288 659 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 DCAF7P61962 342 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 TLE3Q04726 772 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 RAB32Q13637 225 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 EIF5AL1Q6IS14 154 aaKnown RBP11.08□□□□□ -0.64
CAPN1-208ENST00000527323 DEGS2Q6QHC5 323 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 GKN2Q86XP6 184 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 TMEM104Q8NE00 496 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 OR51F2Q8NH61 342 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 NUBPLQ8TB37 319 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 SFT2D1Q8WV19 159 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 C11orf40Q8WZ69 217 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 ARL5BQ96KC2 179 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 UQCC2Q9BRT2 126 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 GPR132Q9UNW8 380 aa11.08□□□□□ -0.64
CAPN1-208ENST00000527323 RP1L1Q8IWN7 2480 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-208ENST00000527323 TRBV6-7A0A0A0MS04 114 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 MS4A18H0YCH9 400 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 TSPAN2O60636 221 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 CHRM2P08172 466 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 GIMD1P0DJR0 217 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 CD80P33681 288 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 CAPZBP47756 277 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 QRFPP83859 136 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 PNLIPRP3Q17RR3 467 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 MST1LQ2TV78 715 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 MS4A18Q3C1V0 323 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 C10orf91Q5T1B1 145 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 CADM4Q8NFZ8 388 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 RAB18Q9NP72 206 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 RCC2Q9P258 522 aaKnown RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 RHBDD3Q9Y3P4 386 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 ZNF354AO60765 605 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 CRTAPO75718 401 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 KNG1P01042 644 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 SFTA3P0C7M3 94 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 ARL4DP49703 201 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 DAP3P51398 398 aaKnown RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 ELAVL1Q15717 326 aaKnown RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 RPL7L1Q6DKI1 246 aaKnown RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 RNF133Q8WVZ7 376 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 DAZLQ92904 295 aaKnown RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 OR10C1Q96KK4 312 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 SCGB3A2Q96PL1 93 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 TAF9BQ9HBM6 251 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 ACKR4Q9NPB9 350 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 FANCFQ9NPI8 374 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 FAM206AQ9NX38 181 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 VDAC3Q9Y277 283 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 MMACHCQ9Y4U1 282 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 WIF1Q9Y5W5 379 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 A0A1W2PP11 408 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 PQLC2LA1A4F0 135 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 MEX3AA1L020 520 aaKnown RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 LMO7DNF2Z398 122 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 GLAP06280 429 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 ZNF806P0C7X5 589 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 GLRA1P23415 457 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 AKR1C3P42330 323 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 CAV2P51636 162 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 RAB5BP61020 215 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 SNRPEP62304 92 aaKnown RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 EIF5AP63241 154 aaKnown RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 ANKRD55Q3KP44 614 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms