RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ENPP5Q9UJA9 477 aa14.08□□□□□ -0.16
CAPN1-205ENST00000526954 SF3B6Q9Y3B4 125 aaKnown RBP14.08□□□□□ -0.16
CAPN1-205ENST00000526954 NOP16Q9Y3C1 178 aaKnown RBP14.08□□□□□ -0.16
CAPN1-205ENST00000526954 RHBDD3Q9Y3P4 386 aa14.08□□□□□ -0.16
CAPN1-205ENST00000526954 APCP25054 2843 aa14.08□□□□□ -0.16
CAPN1-205ENST00000526954 UNC79Q9P2D8 2635 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 ZSCAN5BA6NJL1 495 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 C17orf100A8MU93 164 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 H3BSH0 61 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 GMDSO60547 372 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 RAF1P04049 648 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 NAT2P11245 290 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 FAHP16930 419 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 PSMB9P28065 219 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 GP2P55259 537 aaKnown RBP14.07□□□□□ -0.16
CAPN1-205ENST00000526954 TRAM1Q15629 374 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 SSX1Q16384 188 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 TSTQ16762 297 aaKnown RBP14.07□□□□□ -0.16
CAPN1-205ENST00000526954 TMEM42Q69YG0 159 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 OR13C3Q8NGS6 347 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 GTF3AQ92664 365 aaKnown RBP14.07□□□□□ -0.16
CAPN1-205ENST00000526954 NRGNQ92686 78 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 CACNG6Q9BXT2 260 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 PLEKHA1Q9HB21 404 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 ABCB9Q9NP78 766 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 NDUFB11Q9NX14 153 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 NKIRAS2Q9NYR9 191 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 DHDHQ9UQ10 334 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 MPC1Q9Y5U8 109 aa14.07□□□□□ -0.16
CAPN1-205ENST00000526954 CHD3Q12873 2000 aaKnown RBP14.07□□□□□ -0.16
CAPN1-205ENST00000526954 TACC2O95359 2948 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 CCRL2O00421 344 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 MLNRO43193 412 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 LMX1BO60663 402 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 IGHV1-46P01743 117 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 PAX1P15863 534 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 CA6P23280 308 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 PSMA1P25786 263 aaKnown RBP14.06□□□□□ -0.16
CAPN1-205ENST00000526954 PCGF3Q3KNV8 242 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 Q499Y3 187 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 PARP16Q8N5Y8 322 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 UBASH3BQ8TF42 649 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 TSEN15Q8WW01 171 aaKnown RBP14.06□□□□□ -0.16
CAPN1-205ENST00000526954 PP6455Q8WZ26 134 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 FGGYQ96C11 551 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 ADAT3Q96EY9 351 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-205ENST00000526954 LURAP1Q96LR2 239 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 PAPOLGQ9BWT3 736 aaKnown RBP14.06□□□□□ -0.16
CAPN1-205ENST00000526954 CXorf56Q9H5V9 222 aa14.06□□□□□ -0.16
CAPN1-205ENST00000526954 SPG11Q96JI7 2443 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 NBPF19A0A087WUL8 3843 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 SC5DO75845 299 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 SERPINA3P01011 423 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 CD2P06729 351 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 CD55P08174 381 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 OCM2P0CE71 109 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 GABRA5P31644 462 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 GNALP38405 381 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 RPS25P62851 125 aaKnown RBP14.05□□□□□ -0.16
CAPN1-205ENST00000526954 OR8G1Q15617 311 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 FAM209AQ5JX71 171 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 CLVS2Q5SYC1 327 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 UNQ9370/PRO34162Q6UXP9 181 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 UTS2BQ765I0 119 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 ZCCHC24Q8N2G6 241 aaKnown RBP14.05□□□□□ -0.16
CAPN1-205ENST00000526954 SPERTQ8NA61 448 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 OR13C5Q8NGS8 318 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 PIGCQ92535 297 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 THRSPQ92748 146 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 TMED9Q9BVK6 235 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 CHST5Q9GZS9 411 aa14.05□□□□□ -0.16
CAPN1-205ENST00000526954 ZNF701Q9NV72 531 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-205ENST00000526954 ASH1LQ9NR48 2969 aaKnown RBP14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ABCA12Q86UK0 2595 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 TRBV5-7A0A0A0MS05 114 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 A6NIN4 97 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ZNF850A8MQ14 1090 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ZNF879B4DU55 563 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 SPRY3O43610 288 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ALX3O95076 343 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 NRASP01111 189 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 HLA-DPB1P04440 258 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ZNF20P17024 532 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 MAGEB1P43366 347 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 PRDX4Q13162 271 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ACSM3Q53FZ2 586 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 SERPINA12Q8IW75 414 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ZDHHC23Q8IYP9 409 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 CELF2-AS1Q8N7Q2 184 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 OR2Z1Q8NG97 314 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 NINJ1Q92982 152 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 TMEM106AQ96A25 262 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ITPKCQ96DU7 683 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ELMOD3Q96FG2 381 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 TECTBQ96PL2 329 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 VRK1Q99986 396 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-205ENST00000526954 ADAT1Q9BUB4 502 aaKnown RBP14.04□□□□□ -0.16
CAPN1-205ENST00000526954 RAB1BQ9H0U4 201 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 PPP1R3EQ9H7J1 279 aa14.04□□□□□ -0.16
CAPN1-205ENST00000526954 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms