RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ROS1P08922 2347 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 HRNRQ86YZ3 2850 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 PRRC2AP48634 2157 aaKnown RBP4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 PRR14LQ5THK1 2151 aa4.57□□□□□ -1.68
HMGB1P40-201ENST00000525121 CSMD2Q7Z408 3487 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PPIAL4EA0A075B759 164 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 A0A096LNT2 108 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 IGHV3-64DA0A0J9YX35 117 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 LOC107986453A0A1B0GWG9 222 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 C5orf63A6NC05 138 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR5B21A6NL26 309 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF850A8MQ14 1090 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PRR32B1ATL7 298 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 E9PQ18 207 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PPIAL4DF5H284 164 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM178BH3BS89 294 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 P2RY10O00398 339 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 DLGAP1O14490 977 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 MAGEB4O15481 346 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAM20BO75063 409 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 GATBO75879 557 aaKnown RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CLIC3O95833 236 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CYB5R3P00387 301 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PNPP00491 289 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 SERPINA3P01011 423 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CST4P01036 141 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 NRASP01111 189 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 TGFAP01135 160 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 IGHA1P01876 353 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 TTRP02766 147 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PPIAL4FP0DN26 164 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 IGHV4-31P0DP07 118 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 RPS2P15880 293 aaKnown RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAHP16930 419 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF20P17024 532 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 GABRB1P18505 474 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CPT2P23786 658 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 DCKP27707 260 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 RIPPLY3P57055 190 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 GNG3P63215 75 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CSNK2BP67870 215 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ADARB1P78563 741 aaKnown RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF85Q03923 595 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 GALEQ14376 348 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ODF4Q2M2E3 257 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CDONQ4KMG0 1287 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM155Q4W5P6 130 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ESCO2Q56NI9 601 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CLVS2Q5SYC1 327 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 C6orf52Q5T4I8 152 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM244Q5VVB8 128 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PRAMEF6Q5VXH4 476 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 Q71RC1 249 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 SSX6Q7RTT6 188 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CATSPERDQ86XM0 798 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 SYS1Q8N2H4 156 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 STX19Q8N4C7 294 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 TEX29Q8N6K0 151 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF676Q8N7Q3 588 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 BOLLQ8N9W6 283 aaKnown RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR8B3Q8NGG8 313 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR52I1Q8NGK6 324 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF420Q8TAQ5 688 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 CNIH3Q8TBE1 160 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 Q8TCH9 128 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 RORBQ92753 470 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 DVL3Q92997 716 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 C10orf35Q96D05 121 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM80Q96HE8 168 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 RNF170Q96K19 258 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 LYZL4Q96KX0 146 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 C4orf36Q96KX1 117 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 TECTBQ96PL2 329 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR8B2Q96RD0 313 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 GSX1Q9H4S2 264 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 Q9H521 79 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 HEATR1Q9H583 2144 aaKnown RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF665Q9H7R5 613 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 AMBNQ9NP70 447 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 C1orf123Q9NWV4 160 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ERVK13-1Q9NX77 482 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 SCN3BQ9NY72 215 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF319Q9P2F9 582 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 NKX1-2Q9UD57 310 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 AASSQ9UDR5 926 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 SLC7A11Q9UPY5 501 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 SLC22A13Q9Y226 551 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PIGLQ9Y2B2 252 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 EXOSC1Q9Y3B2 195 aaKnown RBP4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 RHBDD3Q9Y3P4 386 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PPIAL4AQ9Y536 164 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 PLCE1Q9P212 2302 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 USF3Q68DE3 2245 aa4.56□□□□□ -1.68
HMGB1P40-201ENST00000525121 LRBAP50851 2863 aa4.55□□□□□ -1.68
HMGB1P40-201ENST00000525121 OTOGQ6ZRI0 2925 aa4.55□□□□□ -1.68
HMGB1P40-201ENST00000525121 TRAV38-1A0A0B4J264 116 aa4.55□□□□□ -1.68
HMGB1P40-201ENST00000525121 TRAV20A0A0B4J274 112 aa4.55□□□□□ -1.68
HMGB1P40-201ENST00000525121 A0A0G2JMP0 313 aa4.55□□□□□ -1.68
HMGB1P40-201ENST00000525121 A0A0X1KG70 313 aa4.55□□□□□ -1.68
HMGB1P40-201ENST00000525121 ANKRD61A6NGH8 418 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms